May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

LIGB - LIGT
UniProt:
Length: 736
Sequences: 812
Seq/Len: 1.15
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
381_V 88_V 0.88 0.00
254_V 10_A 0.81 0.00
313_E 169_L 0.81 0.00
35_S 113_S 0.81 0.00
344_Q 41_N 0.80 0.00
501_L 44_L 0.80 0.00
376_R 155_Y 0.79 0.00
206_M 95_P 0.78 0.00
518_Q 71_G 0.77 0.00
224_A 10_A 0.76 0.00
481_R 18_R 0.75 0.00
65_S 166_Y 0.75 0.00
534_V 7_L 0.73 0.00
508_S 156_A 0.72 0.00
41_I 40_D 0.72 0.00
534_V 86_R 0.71 0.00
294_P 17_I 0.71 0.00
41_I 70_P 0.71 0.00
417_L 33_A 0.71 0.00
540_N 60_L 0.70 0.00
436_W 91_G 0.70 0.00
491_A 112_R 0.70 0.00
139_L 123_H 0.70 0.00
87_L 24_W 0.69 0.00
175_S 49_L 0.68 0.00
357_W 118_S 0.67 0.00
481_R 165_R 0.67 0.00
164_V 165_R 0.67 0.00
212_S 44_L 0.67 0.00
259_E 10_A 0.66 0.00
150_K 10_A 0.65 0.00
45_D 140_P 0.65 0.00
538_K 120_R 0.64 0.00
443_H 157_S 0.64 0.00
258_D 23_H 0.64 0.00
398_N 128_L 0.64 0.00
66_A 149_V 0.64 0.00
211_D 114_G 0.63 0.00
119_L 30_P 0.63 0.00
203_A 99_L 0.63 0.00
481_R 156_A 0.62 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0145 seconds.