May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

TAUA - TAUC
UniProt: Q47537 - Q47539
Length: 595
Sequences: 2747
Seq/Len: 5.13
I_Prob: 0.69

TAUA - Taurine-binding periplasmic protein
Paralog alert: 0.60 [within 20: 0.11] - ratio of genomes with paralogs
Cluster includes: SSUA TAUA
TAUC - Taurine transport system permease protein TauC
Paralog alert: 0.65 [within 20: 0.13] - ratio of genomes with paralogs
Cluster includes: ARTM ARTQ GLNP GLTJ GLTK HISM HISQ METI PHNE SSUC TAUC YECS YEHW
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
66_R 234_G 1.38 0.69
160_A 234_G 1.03 0.35
299_E 182_S 0.76 0.14
152_E 223_T 0.76 0.13
220_V 36_T 0.67 0.09
149_G 143_T 0.65 0.08
165_W 90_A 0.65 0.08
164_A 222_A 0.64 0.08
85_V 260_L 0.63 0.07
260_E 37_V 0.62 0.07
163_A 256_L 0.62 0.07
61_G 127_P 0.62 0.07
178_P 208_G 0.61 0.07
184_E 168_V 0.61 0.07
288_K 89_L 0.61 0.07
62_A 135_V 0.60 0.06
145_G 37_V 0.59 0.06
252_L 37_V 0.59 0.06
112_K 92_F 0.58 0.06
218_P 173_I 0.58 0.06
240_D 36_T 0.57 0.05
61_G 135_V 0.57 0.05
247_E 89_L 0.57 0.05
132_T 209_V 0.57 0.05
128_P 152_A 0.56 0.05
210_R 54_P 0.55 0.05
96_F 144_S 0.55 0.05
89_Q 238_A 0.55 0.05
42_D 158_A 0.55 0.05
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.1547 seconds.