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OPENSEQ.org

NUDG - YDJA
UniProt: P77788 - P0ACY1
Length: 318
Sequences: 255
Seq/Len: 0.82
I_Prob: 0.00

NUDG - CTP pyrophosphohydrolase
Paralog alert: 0.73 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: GMM MUTT NUDG NUDJ
YDJA - Putative NAD(P)H nitroreductase YdjA
Paralog alert: 0.81 [within 20: 0.05] - ratio of genomes with paralogs
Cluster includes: NFNB RUTE YDJA
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
89_F 147_G 1.48 0.00
44_S 33_G 1.17 0.00
48_A 124_A 1.11 0.00
15_G 13_A 1.10 0.00
86_V 127_F 1.03 0.00
113_P 33_G 1.02 0.00
30_G 129_G 1.00 0.00
30_G 111_A 0.99 0.00
30_G 158_L 0.97 0.00
42_D 16_L 0.91 0.00
107_E 60_A 0.90 0.00
76_G 122_A 0.90 0.00
101_L 16_L 0.89 0.00
50_V 24_E 0.89 0.00
34_F 142_V 0.88 0.00
21_Q 115_V 0.88 0.00
38_K 126_G 0.88 0.00
108_E 60_A 0.87 0.00
53_L 91_T 0.85 0.00
40_E 32_A 0.84 0.00
17_I 156_G 0.84 0.00
105_S 53_E 0.84 0.00
34_F 19_P 0.83 0.00
17_I 47_F 0.83 0.00
11_I 108_E 0.83 0.00
57_L 5_E 0.83 0.00
90_H 58_F 0.82 0.00
14_D 24_E 0.81 0.00
11_I 164_Q 0.81 0.00
61_A 148_C 0.79 0.00
4_I 59_S 0.79 0.00
122_L 151_Q 0.78 0.00
50_V 177_T 0.78 0.00
107_E 40_K 0.78 0.00
9_A 89_I 0.78 0.00
122_L 124_A 0.78 0.00
109_A 130_I 0.77 0.00
80_H 23_G 0.77 0.00
62_T 61_V 0.76 0.00
108_E 142_V 0.76 0.00
84_W 53_E 0.76 0.00
112_Y 146_F 0.76 0.00
84_W 130_I 0.76 0.00
67_V 42_M 0.75 0.00
67_V 151_Q 0.74 0.00
103_W 114_A 0.74 0.00
7_V 16_L 0.74 0.00
42_D 146_F 0.74 0.00
17_I 67_I 0.74 0.00
68_A 111_A 0.74 0.00
66_Y 118_M 0.74 0.00
90_H 158_L 0.74 0.00
10_I 19_P 0.74 0.00
61_A 160_L 0.74 0.00
30_G 39_H 0.74 0.00
53_L 165_L 0.74 0.00
111_Q 18_E 0.74 0.00
124_A 21_P 0.73 0.00
109_A 85_R 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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