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OPENSEQ.org

HCR - YRAR
UniProt: P75824 - P45469
Length: 533
Sequences: 321
Seq/Len: 0.62
I_Prob: 0.00

HCR - NADH oxidoreductase hcr
Paralog alert: 0.57 [within 20: 0.03] - ratio of genomes with paralogs
Cluster includes: HCR PAAE YEAX
YRAR - Uncharacterized protein YraR
Paralog alert: 0.91 [within 20: 0.62] - ratio of genomes with paralogs
Cluster includes: FCL GALE GM4D HLDD QOR2 RMLB1 RMLB2 RMLD YBJS YEEZ YFCH YRAR
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
71_L 182_V 1.29 0.00
212_Q 57_A 1.14 0.00
293_S 66_V 1.13 0.00
223_F 23_N 0.93 0.00
315_P 107_L 0.92 0.00
119_A 91_V 0.92 0.00
21_T 51_Q 0.91 0.00
247_A 48_H 0.91 0.00
115_L 162_L 0.88 0.00
269_V 159_N 0.87 0.00
184_R 177_I 0.85 0.00
131_R 139_P 0.84 0.00
187_L 50_P 0.80 0.00
14_V 84_I 0.80 0.00
29_L 136_Q 0.80 0.00
141_D 79_S 0.80 0.00
250_F 102_G 0.79 0.00
123_V 7_T 0.79 0.00
252_A 31_A 0.79 0.00
304_A 6_I 0.78 0.00
155_I 4_V 0.78 0.00
95_L 194_E 0.78 0.00
282_K 17_L 0.77 0.00
51_A 3_Q 0.76 0.00
244_L 123_N 0.76 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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