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OPENSEQ.org
GSIA - GSID
UniProt: P75796 - P75799
Length: 926
Sequences: 2017
Seq/Len: 2.38
I_Prob: 0.98
GSIA - Glutathione import ATP-binding protein GsiA
Paralog alert: 0.77 [within 20: 0.09] - ratio of genomes with paralogs
Cluster includes: ALSA ARAG GSIA LSRA MGLA MODF RBSA UUP XYLG YBHF YBIT YEJF YHES YJJK YPHE YTFR 		GSID - Glutathione transport system permease protein GsiD
Paralog alert: 0.77 [within 20: 0.11] - ratio of genomes with paralogs
Cluster includes: DDPB DDPC DPPB DPPC GSIC GSID NIKB NIKC OPPB OPPC SAPB SAPC YEJB YEJE
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3rlfAB:AB:G:FContact Map
3tuiCHDG:CHDG:AEBFContact Map
3d31AB:AB:CDContact Map
2onkABGF:ABGF:CHDIContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
426_E 213_H 2.14 0.98
430_V 204_A 1.73 0.93
368_R 197_E 1.59 0.89
426_E 204_A 1.23 0.64
516_A 214_I 1.12 0.54
415_D 213_H 1.12 0.53
405_F 201_S 1.11 0.52
462_H 300_K 1.07 0.48
412_A 194_T 0.96 0.35
418_Q 213_H 0.95 0.33
462_H 299_P 0.94 0.33
109_I 273_V 0.80 0.19
422_D 212_R 0.75 0.15
491_V 262_R 0.73 0.14
533_R 234_I 0.71 0.13
462_H 298_D 0.71 0.12
424_I 214_I 0.70 0.12
236_A 104_S 0.70 0.12
80_L 97_V 0.69 0.12
370_L 251_T 0.66 0.10
320_V 173_I 0.66 0.10
504_N 234_I 0.65 0.09
485_I 254_W 0.64 0.09
407_F 291_D 0.64 0.09
451_G 194_T 0.63 0.08
65_L 213_H 0.63 0.08
372_R 201_S 0.63 0.08
225_I 228_M 0.63 0.08
562_K 214_I 0.62 0.08
178_M 94_F 0.62 0.08
232_V 43_A 0.62 0.08
418_Q 212_R 0.62 0.08
527_V 254_W 0.61 0.07
188_A 196_I 0.61 0.07
120_V 108_G 0.61 0.07
90_L 51_I 0.61 0.07
486_I 106_A 0.61 0.07
319_L 116_A 0.61 0.07
550_A 55_I 0.60 0.07
427_P 202_I 0.60 0.07
344_S 133_W 0.60 0.07
64_R 115_G 0.60 0.07
416_P 217_G 0.59 0.07
426_E 202_I 0.59 0.07
174_R 104_S 0.59 0.06
20_I 156_V 0.59 0.06
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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