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OPENSEQ.org

PTGA - PTHP
UniProt: P69783 - P0AA04
Length: 254
Sequences: 180
Seq/Len: 0.72
I_Prob: 0.00

PTGA - Glucose-specific phosphotransferase enzyme IIA component
Paralog alert: 0.76 [within 20: 0.05] - ratio of genomes with paralogs
Cluster includes: PTGA
PTHP - Phosphocarrier protein HPr
Paralog alert: 0.51 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: PTHP PTSO
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
53_I 38_N 1.48 0.00
123_F 8_I 1.46 0.00
98_E 35_V 1.32 0.00
35_E 29_F 1.31 0.00
128_L 8_I 1.27 0.00
94_I 8_I 1.15 0.00
70_K 22_F 1.11 0.00
75_N 50_L 1.08 0.00
74_T 48_F 1.07 0.00
108_A 22_F 1.06 0.00
105_K 75_E 1.05 0.00
118_D 70_E 1.05 0.00
89_F 51_Q 1.02 0.00
68_I 71_Q 1.01 0.00
124_D 58_G 1.00 0.00
27_L 62_T 0.95 0.00
167_I 81_M 0.94 0.00
23_I 29_F 0.94 0.00
108_A 47_L 0.93 0.00
43_A 68_E 0.92 0.00
103_G 46_S 0.92 0.00
151_I 68_E 0.91 0.00
131_K 64_S 0.90 0.00
71_I 35_V 0.90 0.00
119_T 79_K 0.90 0.00
54_K 81_M 0.89 0.00
23_I 70_E 0.88 0.00
56_T 33_I 0.88 0.00
106_R 48_F 0.88 0.00
62_A 54_G 0.87 0.00
90_V 53_L 0.87 0.00
167_I 3_Q 0.86 0.00
160_G 82_A 0.86 0.00
5_D 63_I 0.85 0.00
107_I 70_E 0.85 0.00
5_D 12_N 0.85 0.00
65_D 31_S 0.83 0.00
146_E 14_L 0.83 0.00
19_G 70_E 0.83 0.00
130_E 72_K 0.83 0.00
124_D 66_E 0.82 0.00
113_R 66_E 0.82 0.00
114_V 9_T 0.82 0.00
116_V 79_K 0.81 0.00
13_D 61_V 0.81 0.00
86_V 3_Q 0.81 0.00
60_M 68_E 0.80 0.00
19_G 61_V 0.80 0.00
100_K 37_S 0.80 0.00
153_L 29_F 0.80 0.00
166_R 60_V 0.80 0.00
25_A 44_A 0.80 0.00
120_V 28_G 0.79 0.00
87_E 55_L 0.79 0.00
56_T 77_L 0.79 0.00
167_I 69_D 0.79 0.00
167_I 7_T 0.79 0.00
84_S 66_E 0.78 0.00
64_V 31_S 0.78 0.00
88_L 62_T 0.77 0.00
24_I 81_M 0.77 0.00
142_S 69_D 0.77 0.00
129_E 60_V 0.77 0.00
135_T 8_I 0.77 0.00
27_L 3_Q 0.77 0.00
43_A 54_G 0.76 0.00
38_P 46_S 0.76 0.00
62_A 3_Q 0.76 0.00
139_V 70_E 0.76 0.00
45_K 46_S 0.75 0.00
68_I 79_K 0.75 0.00
64_V 76_H 0.75 0.00
150_L 33_I 0.75 0.00
140_V 76_H 0.75 0.00
105_K 5_E 0.74 0.00
94_I 48_F 0.74 0.00
64_V 69_D 0.74 0.00
130_E 83_E 0.73 0.00
72_F 45_K 0.73 0.00
95_D 36_T 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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