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OPENSEQ.org

RSMI - TATD
UniProt: P67087 - P27859
Length: 546
Sequences: 345
Seq/Len: 0.66
I_Prob: 0.00

RSMI - Ribosomal RNA small subunit methyltransferase I
Paralog alert: 0.02 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RSMI
TATD - Tat-linked quality control protein TatD
Paralog alert: 0.46 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: TATD YCFH YJJV
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
238_Q 104_E 1.47 0.00
175_L 121_N 1.46 0.00
111_E 154_F 1.17 0.00
18_P 256_F 1.16 0.00
259_L 256_F 1.15 0.00
41_I 134_R 1.12 0.00
55_H 89_I 1.11 0.00
171_S 32_L 1.10 0.00
166_L 88_A 1.08 0.00
18_P 88_A 1.08 0.00
257_L 40_R 1.07 0.00
262_A 49_A 1.05 0.00
230_L 53_S 1.03 0.00
90_V 120_L 1.03 0.00
230_L 21_V 1.01 0.00
66_H 125_F 1.00 0.00
16_I 251_N 1.00 0.00
99_N 172_G 1.00 0.00
194_L 38_N 1.00 0.00
87_I 45_A 0.99 0.00
53_L 17_R 0.99 0.00
135_P 143_L 0.98 0.00
165_T 135_F 0.98 0.00
271_G 237_R 0.98 0.00
91_S 169_I 0.98 0.00
159_I 87_V 0.97 0.00
109_C 23_C 0.97 0.00
233_E 45_A 0.97 0.00
266_A 38_N 0.96 0.00
79_A 35_T 0.95 0.00
57_G 251_N 0.95 0.00
276_A 130_D 0.94 0.00
91_S 193_I 0.93 0.00
111_E 84_P 0.93 0.00
98_I 111_V 0.92 0.00
99_N 178_C 0.92 0.00
210_V 153_C 0.92 0.00
116_V 111_V 0.91 0.00
128_A 204_A 0.91 0.00
83_E 191_P 0.91 0.00
41_I 79_E 0.91 0.00
42_A 155_T 0.90 0.00
199_T 198_L 0.90 0.00
165_T 86_V 0.89 0.00
65_L 36_G 0.89 0.00
99_N 174_T 0.89 0.00
83_E 228_H 0.89 0.00
65_L 156_G 0.89 0.00
212_E 188_E 0.88 0.00
33_E 65_D 0.87 0.00
165_T 156_G 0.87 0.00
232_V 242_A 0.87 0.00
224_R 206_Y 0.87 0.00
186_L 242_A 0.87 0.00
273_K 208_L 0.86 0.00
186_L 77_I 0.86 0.00
126_I 149_A 0.86 0.00
231_I 137_T 0.86 0.00
63_F 77_I 0.86 0.00
38_V 14_A 0.86 0.00
66_H 36_G 0.86 0.00
111_E 223_P 0.85 0.00
218_K 89_I 0.85 0.00
250_L 256_F 0.85 0.00
219_E 251_N 0.84 0.00
173_H 169_I 0.84 0.00
68_H 125_F 0.84 0.00
277_L 154_F 0.84 0.00
205_I 145_K 0.84 0.00
141_Y 153_C 0.84 0.00
38_V 22_A 0.84 0.00
282_L 256_F 0.83 0.00
11_Q 40_R 0.83 0.00
213_L 174_T 0.83 0.00
91_S 35_T 0.83 0.00
105_L 77_I 0.83 0.00
108_T 229_I 0.83 0.00
184_A 257_G 0.82 0.00
114_I 48_L 0.82 0.00
61_R 40_R 0.82 0.00
185_V 53_S 0.82 0.00
69_N 36_G 0.81 0.00
57_G 142_W 0.81 0.00
33_E 59_A 0.81 0.00
54_Q 255_L 0.81 0.00
81_L 136_M 0.81 0.00
229_V 122_M 0.81 0.00
253_L 81_A 0.81 0.00
136_S 181_R 0.81 0.00
189_S 196_E 0.81 0.00
168_F 208_L 0.81 0.00
79_A 235_H 0.81 0.00
246_A 196_E 0.80 0.00
14_L 79_E 0.80 0.00
266_A 81_A 0.80 0.00
210_V 97_N 0.80 0.00
95_T 59_A 0.79 0.00
131_A 35_T 0.79 0.00
41_I 54_S 0.79 0.00
125_A 186_L 0.79 0.00
98_I 248_T 0.79 0.00
81_L 138_L 0.79 0.00
205_I 200_I 0.79 0.00
280_Y 151_L 0.79 0.00
32_L 72_A 0.79 0.00
114_I 10_S 0.78 0.00
42_A 126_M 0.78 0.00
48_H 113_Q 0.78 0.00
223_R 84_P 0.78 0.00
137_D 132_H 0.78 0.00
216_W 164_C 0.78 0.00
113_G 154_F 0.78 0.00
175_L 182_R 0.78 0.00
57_G 237_R 0.78 0.00
81_L 247_T 0.78 0.00
66_H 149_A 0.77 0.00
148_K 69_W 0.77 0.00
57_G 166_A 0.77 0.00
11_Q 130_D 0.77 0.00
253_L 256_F 0.77 0.00
267_A 208_L 0.77 0.00
187_G 153_C 0.77 0.00
48_H 204_A 0.77 0.00
216_W 208_L 0.77 0.00
109_C 206_Y 0.77 0.00
74_A 230_L 0.77 0.00
136_S 123_P 0.77 0.00
185_V 245_A 0.76 0.00
202_W 249_D 0.76 0.00
185_V 77_I 0.76 0.00
283_E 246_A 0.76 0.00
21_I 170_Y 0.75 0.00
277_L 85_E 0.75 0.00
18_P 77_I 0.75 0.00
97_L 189_L 0.75 0.00
55_H 182_R 0.75 0.00
263_A 256_F 0.75 0.00
279_K 82_A 0.75 0.00
165_T 83_Q 0.75 0.00
167_I 52_Y 0.75 0.00
274_K 237_R 0.74 0.00
21_I 171_I 0.74 0.00
113_G 146_L 0.74 0.00
123_C 147_P 0.74 0.00
53_L 49_A 0.74 0.00
211_G 26_D 0.74 0.00
126_I 4_I 0.74 0.00
212_E 79_E 0.74 0.00
153_R 191_P 0.74 0.00
165_T 118_A 0.74 0.00
126_I 86_V 0.73 0.00
115_R 47_K 0.73 0.00
33_E 23_C 0.73 0.00
206_H 71_A 0.73 0.00
135_P 207_L 0.73 0.00
248_R 212_L 0.73 0.00
222_N 166_A 0.73 0.00
106_V 187_R 0.73 0.00
112_A 38_N 0.73 0.00
194_L 32_L 0.73 0.00
175_L 223_P 0.73 0.00
185_V 159_E 0.73 0.00
149_S 233_I 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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