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OPENSEQ.org

ISPE - PRMC
UniProt: P62615 - P0ACC1
Length: 560
Sequences: 396
Seq/Len: 0.72
I_Prob: 0.00

ISPE - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
Paralog alert: 0.56 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: ISPE KHSE
PRMC - Release factor glutamine methyltransferase
Paralog alert: 0.37 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: PRMB PRMC TRMN6
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
101_G 239_G 1.42 0.00
183_V 166_S 1.27 0.00
176_G 71_L 1.25 0.00
121_L 124_A 1.17 0.00
66_L 73_G 1.14 0.00
138_L 123_I 1.13 0.00
213_V 255_Y 1.13 0.00
250_T 255_Y 1.11 0.00
151_A 78_W 1.11 0.00
116_V 234_L 1.11 0.00
23_D 25_E 1.10 0.00
35_L 221_I 1.09 0.00
108_S 181_V 1.09 0.00
41_I 187_I 1.09 0.00
7_S 113_I 1.08 0.00
171_L 207_L 1.08 0.00
275_L 138_A 1.04 0.00
237_L 113_I 1.04 0.00
179_I 207_L 1.04 0.00
269_V 197_G 1.03 0.00
179_I 264_Y 1.03 0.00
151_A 123_I 1.02 0.00
171_L 187_I 1.02 0.00
187_D 71_L 1.01 0.00
171_L 61_R 1.01 0.00
131_L 127_L 1.00 0.00
257_V 82_L 1.00 0.00
68_V 94_D 0.99 0.00
17_I 196_Q 0.99 0.00
31_L 148_L 0.99 0.00
94_I 127_L 0.98 0.00
179_I 239_G 0.97 0.00
187_D 265_G 0.97 0.00
145_F 207_L 0.96 0.00
179_I 123_I 0.96 0.00
151_A 90_I 0.96 0.00
228_W 215_A 0.96 0.00
17_I 55_L 0.96 0.00
60_V 235_L 0.95 0.00
179_I 242_Q 0.95 0.00
108_S 217_I 0.95 0.00
32_F 65_G 0.94 0.00
142_V 123_I 0.94 0.00
237_L 7_L 0.93 0.00
246_A 224_S 0.93 0.00
65_N 148_L 0.92 0.00
127_S 246_V 0.92 0.00
184_I 123_I 0.92 0.00
218_R 87_A 0.91 0.00
136_L 214_M 0.91 0.00
16_Y 134_C 0.91 0.00
22_A 244_E 0.91 0.00
41_I 246_V 0.91 0.00
61_E 164_L 0.90 0.00
278_L 192_P 0.90 0.00
212_E 243_G 0.90 0.00
201_T 266_D 0.89 0.00
63_E 101_Q 0.89 0.00
59_G 245_A 0.89 0.00
222_V 207_L 0.89 0.00
221_E 214_M 0.89 0.00
69_R 176_Q 0.89 0.00
22_A 210_A 0.89 0.00
153_A 149_A 0.89 0.00
163_V 127_L 0.89 0.00
101_G 130_E 0.88 0.00
101_G 242_Q 0.88 0.00
138_L 242_Q 0.88 0.00
101_G 207_L 0.87 0.00
180_P 181_V 0.87 0.00
41_I 115_D 0.87 0.00
203_L 94_D 0.86 0.00
212_E 68_I 0.86 0.00
244_V 63_R 0.85 0.00
255_R 172_L 0.85 0.00
119_N 149_A 0.85 0.00
74_L 65_G 0.85 0.00
256_Q 71_L 0.85 0.00
163_V 142_M 0.84 0.00
275_L 139_V 0.84 0.00
131_L 90_I 0.84 0.00
156_V 258_V 0.84 0.00
248_F 28_L 0.83 0.00
192_R 273_G 0.83 0.00
184_I 78_W 0.83 0.00
166_P 179_M 0.83 0.00
237_L 163_I 0.83 0.00
135_G 94_D 0.83 0.00
101_G 208_V 0.83 0.00
154_E 273_G 0.83 0.00
178_S 40_L 0.83 0.00
246_A 10_A 0.83 0.00
61_E 256_H 0.82 0.00
254_A 80_L 0.82 0.00
186_K 25_E 0.82 0.00
240_T 216_D 0.82 0.00
35_L 255_Y 0.82 0.00
224_A 138_A 0.82 0.00
4_Q 15_Q 0.82 0.00
170_Y 55_L 0.82 0.00
108_S 236_L 0.81 0.00
129_D 103_L 0.81 0.00
243_C 211_D 0.81 0.00
165_P 90_I 0.81 0.00
238_T 88_T 0.81 0.00
18_T 87_A 0.81 0.00
131_L 100_E 0.81 0.00
101_G 235_L 0.81 0.00
60_V 13_Q 0.81 0.00
199_I 220_I 0.81 0.00
218_R 86_P 0.80 0.00
5_W 260_T 0.80 0.00
104_L 209_A 0.80 0.00
66_L 86_P 0.80 0.00
89_G 62_R 0.80 0.00
64_D 225_R 0.80 0.00
31_L 88_T 0.80 0.00
130_E 181_V 0.80 0.00
248_F 100_E 0.80 0.00
247_E 187_I 0.80 0.00
14_F 120_T 0.80 0.00
121_L 55_L 0.80 0.00
199_I 19_S 0.79 0.00
16_Y 264_Y 0.79 0.00
151_A 242_Q 0.79 0.00
145_F 246_V 0.79 0.00
179_I 99_V 0.79 0.00
151_A 130_E 0.79 0.00
92_I 220_I 0.79 0.00
53_L 177_F 0.78 0.00
150_A 247_R 0.78 0.00
36_D 6_W 0.78 0.00
88_S 189_E 0.78 0.00
29_Q 273_G 0.78 0.00
98_L 268_E 0.78 0.00
151_A 208_V 0.78 0.00
68_V 93_P 0.78 0.00
220_R 22_R 0.78 0.00
13_L 84_V 0.78 0.00
101_G 27_L 0.77 0.00
212_E 270_V 0.77 0.00
215_A 43_G 0.77 0.00
116_V 224_S 0.77 0.00
157_G 90_I 0.77 0.00
156_V 98_L 0.77 0.00
275_L 178_A 0.77 0.00
171_L 239_G 0.76 0.00
65_N 239_G 0.76 0.00
217_K 94_D 0.76 0.00
115_L 181_V 0.76 0.00
246_A 140_D 0.76 0.00
185_F 238_H 0.76 0.00
197_R 264_Y 0.76 0.00
243_C 250_F 0.76 0.00
276_S 88_T 0.75 0.00
145_F 126_A 0.75 0.00
180_P 104_A 0.75 0.00
120_H 70_H 0.75 0.00
198_S 74_V 0.75 0.00
30_T 123_I 0.75 0.00
43_I 40_L 0.75 0.00
271_K 217_I 0.75 0.00
51_I 20_P 0.75 0.00
256_Q 58_L 0.75 0.00
273_A 174_G 0.75 0.00
11_L 193_H 0.75 0.00
142_V 243_G 0.74 0.00
243_C 198_D 0.74 0.00
243_C 143_P 0.74 0.00
272_G 124_A 0.74 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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