May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

AQPZ - MTOX
UniProt: P60844 - P40874
Length: 603
Sequences: 450
Seq/Len: 0.77
I_Prob: 0.00

AQPZ - Aquaporin Z
Paralog alert: 0.53 [within 20: 0.04] - ratio of genomes with paralogs
Cluster includes: AQPZ GLPF
MTOX - N-methyl-L-tryptophan oxidase
Paralog alert: 0.81 [within 20: 0.13] - ratio of genomes with paralogs
Cluster includes: DADA LHGO MTOX PUUB
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
216_G 354_A 1.06 0.00
89_V 173_T 1.04 0.00
93_I 197_I 1.01 0.00
86_I 194_K 0.99 0.00
220_G 30_M 0.96 0.00
72_A 117_L 0.95 0.00
203_E 8_I 0.94 0.00
94_V 180_D 0.93 0.00
67_T 301_C 0.92 0.00
67_T 328_N 0.90 0.00
72_A 119_A 0.90 0.00
9_C 166_Q 0.90 0.00
103_A 193_A 0.88 0.00
98_L 197_I 0.87 0.00
14_W 209_P 0.87 0.00
210_V 84_F 0.84 0.00
120_G 111_Q 0.84 0.00
77_P 190_E 0.84 0.00
214_V 8_I 0.83 0.00
207_F 183_T 0.83 0.00
170_L 129_I 0.83 0.00
140_V 174_A 0.83 0.00
213_I 209_P 0.83 0.00
72_A 171_P 0.83 0.00
154_D 320_I 0.82 0.00
26_A 18_G 0.82 0.00
140_V 237_A 0.81 0.00
93_I 186_T 0.81 0.00
7_A 137_G 0.81 0.00
92_G 207_L 0.80 0.00
6_A 8_I 0.80 0.00
215_G 74_L 0.80 0.00
165_A 179_D 0.78 0.00
155_K 17_A 0.78 0.00
81_V 309_T 0.78 0.00
168_L 8_I 0.77 0.00
213_I 62_P 0.77 0.00
62_F 125_R 0.77 0.00
77_P 31_T 0.77 0.00
150_H 258_L 0.77 0.00
211_V 118_D 0.77 0.00
87_A 6_I 0.76 0.00
62_F 3_Y 0.76 0.00
218_I 5_L 0.76 0.00
68_I 118_D 0.76 0.00
76_F 251_F 0.75 0.00
195_I 172_V 0.75 0.00
13_F 214_Q 0.74 0.00
16_V 185_E 0.74 0.00
34_I 15_A 0.74 0.00
56_H 184_I 0.74 0.00
217_I 29_L 0.73 0.00
42_A 8_I 0.73 0.00
45_L 180_D 0.73 0.00
47_V 261_G 0.73 0.00
136_V 19_Y 0.73 0.00
52_F 313_S 0.73 0.00
143_A 31_T 0.72 0.00
217_I 174_A 0.72 0.00
58_S 283_S 0.72 0.00
149_I 31_T 0.71 0.00
139_L 206_D 0.71 0.00
86_I 294_N 0.71 0.00
117_A 193_A 0.71 0.00
94_V 207_L 0.71 0.00
35_G 6_I 0.71 0.00
82_V 156_I 0.71 0.00
69_G 166_Q 0.71 0.00
214_V 5_L 0.71 0.00
67_T 40_H 0.70 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0806 seconds.