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OPENSEQ.org

CAIA - FIXA
UniProt: P60584 - P60566
Length: 636
Sequences: 670
Seq/Len: 1.07
I_Prob: 0.00

CAIA - Crotonobetainyl-CoA dehydrogenase
Paralog alert: 0.77 [within 20: 0.29] - ratio of genomes with paralogs
Cluster includes: CAIA YDIO
FIXA - Protein FixA
Paralog alert: 0.38 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: FIXA YDIQ YGCR
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
12_F 116_I 0.99 0.00
77_L 51_Q 0.97 0.00
212_F 85_I 0.96 0.00
106_I 116_I 0.93 0.00
58_E 193_K 0.87 0.00
214_D 2_K 0.87 0.00
123_A 139_N 0.85 0.00
329_V 170_L 0.84 0.00
58_E 197_G 0.82 0.00
48_D 87_V 0.81 0.00
223_F 115_L 0.81 0.00
6_N 139_N 0.79 0.00
222_M 116_I 0.74 0.00
304_A 3_I 0.74 0.00
22_S 60_L 0.72 0.00
148_Y 228_K 0.71 0.00
279_I 243_E 0.71 0.00
315_A 97_P 0.71 0.00
292_S 116_I 0.71 0.00
350_F 50_Q 0.69 0.00
164_Y 220_S 0.69 0.00
328_V 221_E 0.69 0.00
214_D 42_I 0.69 0.00
260_A 249_A 0.68 0.00
253_M 180_V 0.68 0.00
24_N 189_I 0.68 0.00
365_E 240_D 0.68 0.00
341_I 104_L 0.67 0.00
259_A 192_M 0.67 0.00
228_N 177_V 0.66 0.00
178_P 21_A 0.66 0.00
298_Y 139_N 0.66 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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