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OPENSEQ.org

YFJV - YGAV
UniProt: P52137 - P77295
Length: 437
Sequences: 290
Seq/Len: 0.68
I_Prob: 0.00

YFJV - Putative arsenical pump membrane protein (Fragment)
Paralog alert: 0.72 [within 20: 0.07] - ratio of genomes with paralogs
Cluster includes: ARSB CITT TTDT YBHI YBIR YFJV
YGAV - Probable HTH-type transcriptional regulator YgaV
Paralog alert: 0.75 [within 20: 0.14] - ratio of genomes with paralogs
Cluster includes: ARSR YGAV
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
7_K 68_I 1.31 0.00
271_I 60_A 1.25 0.00
165_A 66_G 1.13 0.00
316_I 44_L 1.12 0.00
170_V 53_S 1.12 0.00
5_T 30_L 1.12 0.00
161_A 41_A 1.11 0.00
86_S 18_L 1.10 0.00
247_M 44_L 1.07 0.00
243_V 72_R 1.06 0.00
2_A 22_S 1.05 0.00
184_L 82_K 1.05 0.00
270_M 18_L 1.05 0.00
65_V 24_P 1.03 0.00
336_V 74_A 1.02 0.00
243_V 77_I 1.02 0.00
101_I 81_I 1.00 0.00
164_G 44_L 0.99 0.00
219_N 44_L 0.98 0.00
142_L 77_I 0.98 0.00
93_A 58_H 0.97 0.00
316_I 22_S 0.97 0.00
259_G 39_T 0.96 0.00
305_T 29_I 0.95 0.00
276_I 51_S 0.95 0.00
109_R 16_A 0.94 0.00
127_I 67_L 0.94 0.00
2_A 68_I 0.93 0.00
230_T 22_S 0.93 0.00
65_V 53_S 0.91 0.00
13_A 43_E 0.91 0.00
93_A 74_A 0.90 0.00
89_I 29_I 0.90 0.00
63_L 29_I 0.90 0.00
303_N 60_A 0.89 0.00
179_N 93_L 0.89 0.00
332_W 54_A 0.88 0.00
193_I 54_A 0.88 0.00
46_L 77_I 0.88 0.00
313_R 68_I 0.87 0.00
307_T 32_M 0.87 0.00
59_A 47_I 0.86 0.00
134_R 49_G 0.86 0.00
39_G 80_S 0.86 0.00
93_A 22_S 0.86 0.00
222_A 66_G 0.86 0.00
41_S 18_L 0.85 0.00
178_I 73_D 0.85 0.00
200_I 57_Q 0.85 0.00
332_W 49_G 0.84 0.00
163_A 67_L 0.84 0.00
5_T 64_D 0.84 0.00
128_K 81_I 0.84 0.00
212_E 49_G 0.83 0.00
15_D 39_T 0.83 0.00
117_V 46_R 0.83 0.00
214_L 41_A 0.83 0.00
42_Q 79_Y 0.83 0.00
203_Y 44_L 0.82 0.00
318_M 41_A 0.82 0.00
17_L 80_S 0.82 0.00
239_F 53_S 0.82 0.00
221_L 60_A 0.81 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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