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OPENSEQ.org

YRAN - YRAP
UniProt: P45465 - P64596
Length: 322
Sequences: 292
Seq/Len: 0.96
I_Prob: 0.22

YRAN - UPF0102 protein YraN
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: YRAN
YRAP - Uncharacterized protein YraP
Paralog alert: 0.56 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: OSMY YRAP
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
53_I 108_Y 1.73 0.22
66_R 110_E 1.72 0.21
113_V 136_L 1.42 0.10
70_S 24_V 1.19 0.05
79_S 110_E 1.17 0.04
66_R 184_T 1.15 0.04
77_A 70_I 1.14 0.04
36_L 187_F 1.11 0.03
36_L 162_V 1.09 0.03
50_I 126_T 1.08 0.03
112_V 154_G 1.08 0.03
77_A 63_Q 1.05 0.03
66_R 20_V 1.04 0.03
60_T 157_F 1.04 0.03
84_K 163_T 1.04 0.03
52_L 26_G 0.99 0.02
75_G 135_Q 0.99 0.02
52_L 123_S 0.99 0.02
50_I 168_K 0.98 0.02
113_V 15_L 0.98 0.02
124_K 56_S 0.98 0.02
36_L 167_A 0.96 0.02
66_R 69_R 0.95 0.02
108_C 148_K 0.94 0.02
79_S 69_R 0.94 0.02
54_M 187_F 0.94 0.02
95_W 143_K 0.93 0.02
56_E 9_V 0.93 0.02
80_V 58_L 0.91 0.02
107_D 76_Q 0.91 0.02
80_V 36_T 0.91 0.02
67_Y 46_D 0.91 0.02
66_R 111_I 0.90 0.02
121_E 120_G 0.90 0.02
33_G 88_A 0.90 0.02
123_I 81_L 0.89 0.01
73_Y 128_I 0.88 0.01
44_N 177_V 0.88 0.01
23_W 31_G 0.87 0.01
120_V 189_F 0.87 0.01
53_I 53_R 0.87 0.01
39_I 24_V 0.86 0.01
63_V 60_K 0.86 0.01
36_L 152_E 0.86 0.01
37_R 128_I 0.85 0.01
55_R 120_G 0.85 0.01
87_K 29_A 0.85 0.01
91_T 43_T 0.85 0.01
95_W 98_A 0.85 0.01
55_R 113_Q 0.84 0.01
110_F 104_A 0.84 0.01
81_T 104_A 0.84 0.01
88_L 48_G 0.83 0.01
60_T 85_S 0.82 0.01
73_Y 85_S 0.82 0.01
89_L 142_V 0.82 0.01
97_A 146_N 0.82 0.01
46_R 121_E 0.82 0.01
89_L 157_F 0.82 0.01
19_T 33_K 0.81 0.01
69_R 159_M 0.81 0.01
112_V 105_N 0.81 0.01
95_W 38_P 0.81 0.01
53_I 87_N 0.81 0.01
52_L 95_K 0.80 0.01
98_R 50_L 0.80 0.01
84_K 38_P 0.80 0.01
43_V 175_S 0.80 0.01
88_L 89_E 0.80 0.01
63_V 191_K 0.79 0.01
56_E 170_A 0.79 0.01
81_T 133_R 0.79 0.01
92_A 123_S 0.78 0.01
23_W 138_T 0.78 0.01
125_D 169_A 0.78 0.01
29_R 10_L 0.78 0.01
83_S 79_V 0.78 0.01
25_A 159_M 0.78 0.01
91_T 64_I 0.77 0.01
96_L 42_G 0.77 0.01
88_L 49_T 0.77 0.01
54_M 158_L 0.77 0.01
73_Y 87_N 0.77 0.01
112_V 79_V 0.77 0.01
119_E 172_D 0.76 0.01
85_Q 119_L 0.76 0.01
84_K 51_E 0.76 0.01
17_K 190_I 0.76 0.01
116_T 182_R 0.76 0.01
36_L 156_V 0.76 0.01
85_Q 128_I 0.76 0.01
57_G 124_N 0.75 0.01
83_S 142_V 0.75 0.01
53_I 64_I 0.75 0.01
122_W 152_E 0.75 0.01
97_A 185_T 0.75 0.01
122_W 162_V 0.75 0.01
74_G 163_T 0.75 0.01
56_E 156_V 0.75 0.01
53_I 173_I 0.75 0.01
40_A 112_R 0.74 0.01
41_A 54_V 0.74 0.01
112_V 124_N 0.74 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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