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OPENSEQ.org

ALSB - ALSC
UniProt: P39265 - P32720
Length: 637
Sequences: 3856
Seq/Len: 6.59
I_Prob: 0.01

ALSB - D-allose-binding periplasmic protein
Paralog alert: 0.90 [within 20: 0.53] - ratio of genomes with paralogs
Cluster includes: ALSB ARAF ASCG CRA CYTR DGAL EBGR GALR GALS GNTR IDNR LACI LSRB MALI PURR RBSB RBSR TORT TRER XYLF YCJW YPHF YTFQ
ALSC - D-allose transport system permease protein AlsC
Paralog alert: 0.92 [within 20: 0.64] - ratio of genomes with paralogs
Cluster includes: ALSC ARAH LIVH LSRC LSRD MGLC RBSC XYLH YJFF YPHD YTFT
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
208_T 58_V 0.95 0.01
77_D 297_N 0.88 0.01
81_K 300_Q 0.85 0.01
209_N 297_N 0.84 0.01
106_K 51_N 0.77 0.01
187_Q 113_V 0.65 0.01
76_E 59_Q 0.61 0.01
101_A 33_A 0.59 0.01
96_L 218_I 0.56 0.01
80_N 51_N 0.55 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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