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OPENSEQ.org

SGBU - YIAJ
UniProt: P37679 - P37671
Length: 568
Sequences: 367
Seq/Len: 0.69
I_Prob: 0.00

SGBU - Putative L-ribulose-5-phosphate 3-epimerase SgbU
Paralog alert: 0.70 [within 20: 0.18] - ratio of genomes with paralogs
Cluster includes: END4 FRLC HYI SGBU ULAE YCJR YGBM
YIAJ - HTH-type transcriptional regulator YiaJ
Paralog alert: 0.70 [within 20: 0.11] - ratio of genomes with paralogs
Cluster includes: ALLR ICLR KDGR MHPR RHMR YAGI YIAJ YJHI
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
171_E 32_L 0.96 0.00
71_S 58_T 0.94 0.00
162_S 84_T 0.92 0.00
139_A 130_I 0.92 0.00
26_A 103_I 0.91 0.00
34_V 156_C 0.90 0.00
127_G 164_M 0.89 0.00
169_W 148_I 0.89 0.00
180_V 35_I 0.89 0.00
27_K 209_A 0.88 0.00
208_I 35_I 0.88 0.00
230_G 236_Y 0.87 0.00
69_I 234_V 0.87 0.00
239_I 197_M 0.87 0.00
173_L 34_E 0.85 0.00
95_E 223_I 0.85 0.00
109_I 139_T 0.85 0.00
62_M 176_W 0.85 0.00
273_R 202_A 0.84 0.00
171_E 237_A 0.84 0.00
203_D 225_V 0.82 0.00
144_A 74_T 0.81 0.00
276_E 227_V 0.80 0.00
112_I 123_S 0.79 0.00
180_V 53_G 0.79 0.00
240_F 229_D 0.78 0.00
58_L 207_S 0.78 0.00
194_V 224_A 0.77 0.00
264_P 262_T 0.77 0.00
59_V 91_G 0.77 0.00
194_V 35_I 0.77 0.00
7_G 269_E 0.76 0.00
134_E 203_H 0.76 0.00
235_D 169_P 0.76 0.00
147_Q 258_P 0.75 0.00
91_E 72_V 0.75 0.00
230_G 197_M 0.74 0.00
208_I 209_A 0.74 0.00
197_E 72_V 0.74 0.00
193_D 132_I 0.74 0.00
106_D 79_G 0.74 0.00
241_K 132_I 0.74 0.00
236_F 59_V 0.74 0.00
157_T 72_V 0.73 0.00
21_E 94_A 0.73 0.00
18_S 48_L 0.73 0.00
59_V 232_G 0.73 0.00
181_Y 266_I 0.72 0.00
194_V 121_F 0.72 0.00
132_F 196_A 0.72 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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