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OPENSEQ.org
CBPA - RSME
UniProt: P36659 - P0AGL7
Length: 549
Sequences: 386
Seq/Len: 0.72
I_Prob: 0.01
CBPA - Curved DNA-binding protein
Paralog alert: 0.50 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: CBPA DNAJ 		RSME - Ribosomal RNA small subunit methyltransferase E
Paralog alert: 0.06 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RSME
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
233_L 131_W 1.58 0.01
162_V 192_L 1.46 0.01
182_P 131_W 1.43 0.01
106_A 191_L 1.40 0.01
4_K 34_M 1.30 0.00
62_R 58_S 1.28 0.00
29_A 193_I 1.27 0.00
29_A 84_Q 1.24 0.00
288_Q 90_E 1.23 0.00
38_K 140_E 1.21 0.00
57_S 226_T 1.21 0.00
178_G 109_P 1.20 0.00
54_E 119_L 1.19 0.00
53_W 101_E 1.18 0.00
216_P 5_R 1.17 0.00
280_D 40_L 1.15 0.00
124_V 104_V 1.13 0.00
268_Y 201_A 1.13 0.00
275_M 89_G 1.13 0.00
275_M 64_V 1.12 0.00
177_K 82_L 1.12 0.00
4_K 232_I 1.09 0.00
49_V 137_A 1.09 0.00
83_H 50_F 1.09 0.00
249_Q 95_T 1.09 0.00
164_I 35_G 1.07 0.00
197_H 26_N 1.07 0.00
261_K 52_A 1.06 0.00
39_E 104_V 1.06 0.00
124_V 19_A 1.06 0.00
68_M 24_A 1.04 0.00
81_F 219_P 1.04 0.00
197_H 142_C 1.04 0.00
188_P 219_P 1.04 0.00
258_L 41_Q 1.03 0.00
175_R 139_C 1.03 0.00
75_P 158_A 1.03 0.00
132_L 102_L 1.03 0.00
275_M 230_T 1.03 0.00
194_L 119_L 1.02 0.00
65_Y 98_K 1.01 0.00
290_L 232_I 1.01 0.00
232_T 101_E 1.01 0.00
173_R 4_P 1.01 0.00
131_T 233_T 1.01 0.00
164_I 215_I 1.00 0.00
36_V 84_Q 1.00 0.00
123_E 224_T 1.00 0.00
129_E 153_A 0.99 0.00
62_R 125_N 0.99 0.00
226_A 95_T 0.97 0.00
235_E 220_R 0.97 0.00
86_G 154_M 0.96 0.00
4_K 93_E 0.96 0.00
221_E 123_R 0.96 0.00
170_N 82_L 0.96 0.00
197_H 107_I 0.96 0.00
256_K 137_A 0.96 0.00
215_V 235_L 0.96 0.00
121_E 126_K 0.96 0.00
5_D 37_G 0.96 0.00
57_S 52_A 0.95 0.00
126_V 115_C 0.95 0.00
128_L 172_H 0.95 0.00
19_K 128_L 0.95 0.00
27_R 7_Y 0.95 0.00
210_D 201_A 0.95 0.00
60_Q 201_A 0.94 0.00
126_V 113_E 0.94 0.00
136_K 115_C 0.94 0.00
57_S 101_E 0.94 0.00
226_A 232_I 0.93 0.00
215_V 87_S 0.93 0.00
168_V 180_N 0.93 0.00
260_S 200_S 0.93 0.00
48_E 135_A 0.93 0.00
49_V 42_L 0.92 0.00
50_A 232_I 0.92 0.00
166_A 87_S 0.92 0.00
207_V 100_I 0.92 0.00
131_T 102_L 0.92 0.00
290_L 97_Q 0.92 0.00
45_R 226_T 0.92 0.00
60_Q 127_K 0.91 0.00
1_M 224_T 0.91 0.00
194_L 105_S 0.91 0.00
25_Y 175_A 0.90 0.00
130_E 93_E 0.90 0.00
6_Y 209_R 0.90 0.00
163_K 52_A 0.90 0.00
242_P 5_R 0.90 0.00
173_R 143_G 0.90 0.00
157_P 52_A 0.90 0.00
164_I 211_Q 0.89 0.00
194_L 239_F 0.89 0.00
114_A 173_P 0.89 0.00
130_E 94_F 0.89 0.00
29_A 44_D 0.89 0.00
168_V 19_A 0.88 0.00
241_I 175_A 0.88 0.00
173_R 174_R 0.88 0.00
290_L 153_A 0.88 0.00
63_A 137_A 0.88 0.00
17_D 47_N 0.88 0.00
271_L 130_Q 0.88 0.00
215_V 39_A 0.88 0.00
200_P 40_L 0.87 0.00
241_I 9_P 0.87 0.00
4_K 139_C 0.87 0.00
286_L 96_I 0.87 0.00
12_V 150_I 0.87 0.00
142_N 239_F 0.87 0.00
182_P 110_L 0.86 0.00
126_V 207_T 0.86 0.00
181_T 22_E 0.86 0.00
101_I 38_Q 0.85 0.00
160_L 126_K 0.85 0.00
236_S 200_S 0.85 0.00
15_T 188_R 0.85 0.00
114_A 172_H 0.85 0.00
114_A 130_Q 0.85 0.00
173_R 171_L 0.85 0.00
65_Y 134_I 0.84 0.00
168_V 122_E 0.84 0.00
269_A 51_D 0.84 0.00
91_A 230_T 0.84 0.00
247_A 64_V 0.84 0.00
126_V 18_I 0.84 0.00
101_I 30_R 0.84 0.00
247_A 230_T 0.84 0.00
48_E 149_E 0.84 0.00
217_V 219_P 0.84 0.00
247_A 116_G 0.84 0.00
54_E 176_S 0.83 0.00
175_R 232_I 0.83 0.00
161_N 169_L 0.83 0.00
149_F 112_S 0.83 0.00
238_L 99_S 0.83 0.00
287_W 173_P 0.83 0.00
217_V 74_R 0.83 0.00
217_V 132_Q 0.83 0.00
36_V 25_A 0.83 0.00
47_K 235_L 0.82 0.00
132_L 236_Q 0.82 0.00
111_Q 228_A 0.82 0.00
161_N 170_N 0.82 0.00
193_W 52_A 0.82 0.00
128_L 238_R 0.82 0.00
17_D 125_N 0.82 0.00
248_G 100_I 0.82 0.00
133_T 228_A 0.82 0.00
31_K 180_N 0.81 0.00
152_I 114_R 0.81 0.00
292_D 235_L 0.81 0.00
239_L 133_K 0.81 0.00
240_T 30_R 0.81 0.00
170_N 231_A 0.80 0.00
137_R 34_M 0.80 0.00
55_V 10_E 0.80 0.00
17_D 63_E 0.80 0.00
273_I 106_L 0.80 0.00
124_V 216_L 0.80 0.00
53_W 225_E 0.80 0.00
92_E 80_I 0.80 0.00
123_E 82_L 0.80 0.00
8_A 98_K 0.80 0.00
145_V 82_L 0.80 0.00
277_P 207_T 0.80 0.00
218_S 5_R 0.80 0.00
241_I 208_A 0.80 0.00
137_R 130_Q 0.80 0.00
25_Y 232_I 0.80 0.00
247_A 122_E 0.79 0.00
20_T 126_K 0.79 0.00
114_A 97_Q 0.79 0.00
256_K 229_L 0.79 0.00
147_N 19_A 0.79 0.00
49_V 136_I 0.79 0.00
114_A 139_C 0.79 0.00
126_V 128_L 0.79 0.00
199_A 169_L 0.79 0.00
115_T 241_D 0.79 0.00
211_L 237_V 0.79 0.00
198_I 3_I 0.79 0.00
287_W 22_E 0.78 0.00
49_V 193_I 0.78 0.00
152_I 56_S 0.78 0.00
217_V 234_A 0.78 0.00
17_D 8_H 0.78 0.00
243_P 167_L 0.78 0.00
62_R 139_C 0.78 0.00
283_T 72_D 0.78 0.00
137_R 6_I 0.78 0.00
285_A 162_E 0.78 0.00
201_H 131_W 0.78 0.00
164_I 128_L 0.78 0.00
166_A 115_C 0.77 0.00
160_L 145_N 0.77 0.00
233_L 18_I 0.77 0.00
63_A 23_D 0.77 0.00
231_P 147_V 0.77 0.00
288_Q 8_H 0.77 0.00
185_N 77_P 0.77 0.00
174_I 131_W 0.77 0.00
132_L 101_E 0.77 0.00
207_V 71_I 0.77 0.00
107_R 193_I 0.77 0.00
4_K 123_R 0.77 0.00
53_W 226_T 0.77 0.00
145_V 57_A 0.77 0.00
271_L 13_T 0.77 0.00
214_V 99_S 0.77 0.00
205_D 155_D 0.77 0.00
241_I 181_T 0.76 0.00
240_T 62_V 0.76 0.00
182_P 119_L 0.76 0.00
160_L 200_S 0.76 0.00
8_A 117_V 0.76 0.00
220_W 192_L 0.76 0.00
62_R 116_G 0.76 0.00
54_E 44_D 0.76 0.00
68_M 156_L 0.76 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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