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OPENSEQ.org

COBT - COBU
UniProt: P36562 - P0AE76
Length: 540
Sequences: 515
Seq/Len: 0.98
I_Prob: 0.00

COBT - Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
Paralog alert: 0.09 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: COBT
COBU - Bifunctional adenosylcobalamin biosynthesis protein CobU
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: COBU
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
66_M 123_C 1.10 0.00
138_I 131_V 1.09 0.00
72_V 16_H 1.06 0.00
15_D 44_I 1.04 0.00
241_G 59_E 0.99 0.00
153_L 41_A 0.99 0.00
68_A 20_L 0.98 0.00
297_A 86_M 0.98 0.00
296_G 172_V 0.97 0.00
98_G 145_S 0.97 0.00
218_V 137_V 0.96 0.00
94_R 42_A 0.92 0.00
185_A 173_V 0.92 0.00
170_L 20_L 0.91 0.00
314_M 30_I 0.91 0.00
62_A 44_I 0.91 0.00
298_R 48_R 0.89 0.00
243_D 85_T 0.87 0.00
70_H 85_T 0.86 0.00
182_T 137_V 0.86 0.00
304_L 134_T 0.85 0.00
242_F 148_A 0.85 0.00
328_I 80_L 0.85 0.00
110_V 44_I 0.84 0.00
320_S 146_R 0.84 0.00
237_A 5_V 0.82 0.00
70_H 149_R 0.82 0.00
209_D 118_S 0.81 0.00
28_G 91_L 0.81 0.00
189_S 151_F 0.81 0.00
232_G 121_A 0.81 0.00
254_A 151_F 0.80 0.00
81_P 10_R 0.80 0.00
197_E 45_E 0.79 0.00
204_A 86_M 0.79 0.00
242_F 166_A 0.79 0.00
320_S 178_V 0.79 0.00
56_P 60_R 0.79 0.00
19_M 130_V 0.79 0.00
68_A 86_M 0.78 0.00
296_G 134_T 0.78 0.00
86_A 173_V 0.78 0.00
27_D 137_V 0.77 0.00
287_I 158_V 0.76 0.00
231_D 44_I 0.76 0.00
307_E 23_D 0.76 0.00
80_S 86_M 0.76 0.00
34_G 43_R 0.75 0.00
239_V 50_G 0.75 0.00
155_D 151_F 0.75 0.00
83_E 46_H 0.75 0.00
329_I 169_V 0.75 0.00
314_M 93_D 0.74 0.00
175_E 29_Y 0.74 0.00
145_S 22_G 0.73 0.00
103_A 158_V 0.73 0.00
331_A 9_A 0.73 0.00
175_E 155_A 0.73 0.00
117_I 78_V 0.73 0.00
267_L 64_L 0.73 0.00
68_A 174_S 0.72 0.00
145_S 49_Q 0.72 0.00
314_M 161_Q 0.72 0.00
83_E 157_R 0.72 0.00
213_N 114_A 0.72 0.00
308_P 83_V 0.71 0.00
35_S 67_L 0.71 0.00
341_E 50_G 0.71 0.00
130_R 57_T 0.71 0.00
88_Q 85_T 0.71 0.00
153_L 166_A 0.71 0.00
220_R 16_H 0.70 0.00
287_I 24_S 0.70 0.00
338_N 19_A 0.70 0.00
81_P 40_M 0.70 0.00
130_R 129_K 0.70 0.00
241_G 85_T 0.69 0.00
258_G 42_A 0.69 0.00
235_V 162_L 0.69 0.00
107_G 53_E 0.69 0.00
247_I 5_V 0.69 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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