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OPENSEQ.org

YEJA - YEJE
UniProt: P33913 - P33915
Length: 945
Sequences: 2133
Seq/Len: 2.46
I_Prob: 0.07

YEJA - Uncharacterized protein YejA
Paralog alert: 0.78 [within 20: 0.18] - ratio of genomes with paralogs
Cluster includes: DDPA DPPA GSIB MPPA NIKA OPPA SAPA SGRR YBAE YEJA YGIS
YEJE - Inner membrane ABC transporter permease protein YejE
Paralog alert: 0.74 [within 20: 0.09] - ratio of genomes with paralogs
Cluster includes: DDPB DDPC DPPB DPPC GSIC GSID NIKB NIKC OPPB OPPC SAPB SAPC YEJB YEJE
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
450_Q 289_G 1.23 0.07
265_K 305_Q 0.90 0.03
265_K 282_L 0.86 0.02
451_H 105_I 0.84 0.02
190_P 218_L 0.84 0.02
56_I 156_V 0.79 0.02
444_Q 127_A 0.79 0.02
135_D 292_S 0.72 0.01
462_I 288_L 0.71 0.01
267_G 254_L 0.69 0.01
226_Y 323_L 0.69 0.01
526_I 147_G 0.66 0.01
463_R 235_I 0.65 0.01
523_I 159_V 0.65 0.01
97_S 253_M 0.64 0.01
328_I 217_S 0.63 0.01
214_R 137_L 0.63 0.01
454_Q 25_L 0.62 0.01
52_K 234_Y 0.61 0.01
190_P 215_W 0.61 0.01
572_Q 176_G 0.61 0.01
221_G 282_L 0.60 0.01
323_R 231_N 0.59 0.01
534_E 304_L 0.59 0.01
543_L 36_L 0.58 0.01
190_P 297_L 0.58 0.01
256_D 301_K 0.57 0.01
481_M 123_L 0.57 0.01
190_P 276_L 0.57 0.01
339_K 212_L 0.57 0.01
502_S 224_A 0.57 0.01
278_K 151_T 0.57 0.01
523_I 146_F 0.56 0.01
170_I 253_M 0.56 0.01
435_L 322_S 0.56 0.01
249_I 171_K 0.56 0.01
125_F 206_L 0.56 0.01
220_M 297_L 0.56 0.01
218_W 147_G 0.56 0.01
527_I 195_L 0.55 0.01
213_Y 201_P 0.55 0.01
528_A 30_V 0.55 0.01
412_E 151_T 0.55 0.01
303_S 133_L 0.54 0.01
88_F 254_L 0.54 0.01
264_F 135_R 0.54 0.01
230_K 33_G 0.54 0.01
102_I 148_L 0.54 0.01
190_P 165_Q 0.54 0.01
135_D 218_L 0.54 0.01
135_D 276_L 0.54 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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