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OPENSEQ.org
YEJA - YEJB
UniProt: P33913 - P0AFU0
Length: 968
Sequences: 2721
Seq/Len: 3.14
I_Prob: 0.90
YEJA - Uncharacterized protein YejA
Paralog alert: 0.78 [within 20: 0.18] - ratio of genomes with paralogs
Cluster includes: DDPA DPPA GSIB MPPA NIKA OPPA SAPA SGRR YBAE YEJA YGIS 		YEJB - Inner membrane ABC transporter permease protein YejB
Paralog alert: 0.79 [within 20: 0.10] - ratio of genomes with paralogs
Cluster includes: DDPB DDPC DPPB DPPC GSIC GSID NIKB NIKC OPPB OPPC SAPB SAPC YEJB YEJE
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
466_D 325_R 1.67 0.90
263_A 205_R 1.01 0.39
255_L 316_L 0.90 0.28
266_A 195_G 0.68 0.11
556_M 235_T 0.65 0.09
266_A 200_D 0.63 0.08
127_D 201_L 0.61 0.08
470_I 282_A 0.60 0.07
262_E 190_I 0.59 0.07
221_G 128_L 0.58 0.07
161_K 159_A 0.58 0.06
412_E 136_S 0.57 0.06
232_Y 140_G 0.57 0.06
330_L 355_V 0.57 0.06
272_R 304_L 0.57 0.06
270_D 285_L 0.57 0.06
265_K 146_I 0.56 0.06
254_Y 310_S 0.56 0.06
221_G 132_S 0.56 0.06
469_Q 325_R 0.56 0.06
215_V 280_R 0.55 0.05
135_D 341_G 0.55 0.05
516_S 16_L 0.55 0.05
221_G 287_I 0.55 0.05
271_L 279_F 0.55 0.05
449_F 22_I 0.55 0.05
264_F 136_S 0.55 0.05
260_A 175_I 0.54 0.05
55_Q 233_L 0.54 0.05
226_Y 260_V 0.54 0.05
98_Y 158_K 0.54 0.05
183_L 144_T 0.54 0.05
220_M 123_A 0.53 0.05
453_L 295_I 0.53 0.05
402_N 225_L 0.53 0.05
121_P 22_I 0.52 0.04
434_E 9_L 0.52 0.04
215_V 237_I 0.52 0.04
266_A 253_D 0.52 0.04
171_E 347_V 0.52 0.04
59_S 84_E 0.52 0.04
269_F 89_I 0.51 0.04
337_M 323_V 0.51 0.04
542_A 84_E 0.51 0.04
259_V 195_G 0.51 0.04
270_D 170_S 0.51 0.04
507_S 186_A 0.50 0.04
104_E 97_K 0.50 0.04
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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