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OPENSEQ.org

ALSE - RSGA
UniProt: P32719 - P39286
Length: 581
Sequences: 355
Seq/Len: 0.72
I_Prob: 0.00

ALSE - D-allulose-6-phosphate 3-epimerase
Paralog alert: 0.20 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: ALSE RPE SGCE
RSGA - Putative ribosome biogenesis GTPase RsgA
Paralog alert: 0.10 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RSGA
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
172_V 120_A 1.38 0.00
60_L 137_S 1.15 0.00
46_P 123_I 1.14 0.00
148_P 314_E 1.09 0.00
92_N 312_I 1.08 0.00
209_A 201_L 1.07 0.00
192_F 195_Q 1.05 0.00
42_L 157_I 1.02 0.00
43_T 235_L 1.01 0.00
131_K 158_V 1.01 0.00
96_F 229_G 1.01 0.00
192_F 273_F 1.00 0.00
62_C 197_G 0.99 0.00
12_L 252_A 0.99 0.00
147_I 144_Y 0.97 0.00
4_S 255_L 0.97 0.00
124_Y 155_P 0.95 0.00
164_E 282_Q 0.95 0.00
25_H 140_I 0.94 0.00
52_V 212_F 0.93 0.00
41_N 72_S 0.93 0.00
210_W 323_E 0.92 0.00
17_E 218_V 0.92 0.00
2_K 331_R 0.91 0.00
111_L 41_E 0.91 0.00
98_L 130_S 0.90 0.00
41_N 301_D 0.90 0.00
136_T 247_Q 0.90 0.00
165_G 152_Q 0.89 0.00
206_I 274_G 0.89 0.00
131_K 64_C 0.89 0.00
12_L 216_S 0.89 0.00
75_Q 106_V 0.89 0.00
209_A 192_S 0.88 0.00
2_K 157_I 0.88 0.00
86_L 187_V 0.88 0.00
9_C 264_V 0.88 0.00
23_D 156_I 0.87 0.00
132_I 157_I 0.86 0.00
23_D 200_P 0.86 0.00
19_I 62_H 0.86 0.00
172_V 163_D 0.86 0.00
96_F 262_G 0.86 0.00
60_L 53_D 0.86 0.00
42_L 132_I 0.86 0.00
78_R 154_E 0.85 0.00
29_F 193_H 0.85 0.00
132_I 163_D 0.85 0.00
111_L 290_F 0.85 0.00
43_T 72_S 0.85 0.00
128_K 255_L 0.85 0.00
90_T 235_L 0.84 0.00
162_E 201_L 0.84 0.00
126_I 102_E 0.84 0.00
167_E 327_E 0.83 0.00
52_V 290_F 0.83 0.00
204_E 314_E 0.83 0.00
25_H 251_T 0.83 0.00
28_Y 139_N 0.82 0.00
25_H 50_M 0.82 0.00
11_D 59_G 0.82 0.00
96_F 253_A 0.82 0.00
12_L 254_R 0.82 0.00
15_F 312_I 0.81 0.00
177_N 276_W 0.81 0.00
172_V 239_I 0.81 0.00
26_A 288_V 0.81 0.00
49_V 129_V 0.81 0.00
197_S 213_A 0.81 0.00
96_F 287_F 0.80 0.00
43_T 189_M 0.80 0.00
136_T 190_V 0.80 0.00
177_N 82_R 0.80 0.00
184_L 155_P 0.80 0.00
88_P 101_H 0.80 0.00
126_I 309_G 0.79 0.00
113_L 162_I 0.79 0.00
77_A 173_V 0.79 0.00
176_C 291_H 0.79 0.00
157_L 44_V 0.79 0.00
43_T 305_D 0.78 0.00
36_G 68_R 0.78 0.00
71_D 290_F 0.78 0.00
44_L 159_L 0.78 0.00
3_I 62_H 0.78 0.00
27_D 323_E 0.78 0.00
176_C 174_N 0.78 0.00
33_I 185_Y 0.78 0.00
26_A 125_Q 0.77 0.00
203_A 327_E 0.77 0.00
176_C 257_H 0.77 0.00
110_G 238_D 0.77 0.00
18_Q 218_V 0.77 0.00
42_L 187_V 0.77 0.00
130_D 299_Y 0.77 0.00
168_Y 105_S 0.77 0.00
59_P 45_I 0.77 0.00
66_V 202_E 0.76 0.00
165_G 223_L 0.76 0.00
176_C 339_V 0.76 0.00
155_A 152_Q 0.76 0.00
48_F 252_A 0.76 0.00
154_L 175_E 0.76 0.00
77_A 248_H 0.76 0.00
43_T 75_T 0.76 0.00
124_Y 160_N 0.76 0.00
192_F 55_E 0.76 0.00
42_L 137_S 0.76 0.00
70_Q 139_N 0.76 0.00
210_W 291_H 0.76 0.00
142_A 251_T 0.76 0.00
73_I 262_G 0.75 0.00
85_T 124_D 0.75 0.00
111_L 312_I 0.75 0.00
70_Q 65_N 0.75 0.00
205_N 148_C 0.74 0.00
92_N 301_D 0.74 0.00
56_A 275_L 0.74 0.00
157_L 324_T 0.74 0.00
73_I 275_L 0.74 0.00
125_Y 331_R 0.74 0.00
85_T 137_S 0.74 0.00
180_T 234_I 0.74 0.00
154_L 234_I 0.74 0.00
112_I 143_R 0.73 0.00
29_F 188_L 0.73 0.00
48_F 192_S 0.73 0.00
31_I 237_N 0.73 0.00
84_I 290_F 0.73 0.00
57_T 201_L 0.73 0.00
82_D 123_I 0.73 0.00
92_N 142_D 0.73 0.00
192_F 63_R 0.73 0.00
27_D 212_F 0.73 0.00
62_C 263_D 0.73 0.00
198_G 331_R 0.73 0.00
19_I 153_I 0.73 0.00
123_K 327_E 0.72 0.00
62_C 158_V 0.72 0.00
29_F 247_Q 0.72 0.00
72_Y 218_V 0.72 0.00
172_V 202_E 0.72 0.00
77_A 43_I 0.72 0.00
18_Q 71_R 0.72 0.00
155_A 313_R 0.72 0.00
197_S 191_S 0.72 0.00
89_E 225_N 0.72 0.00
170_I 100_V 0.72 0.00
180_T 300_R 0.72 0.00
136_T 165_L 0.72 0.00
7_L 290_F 0.72 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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