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OPENSEQ.org

ALSK - RPIR
UniProt: P32718 - P0ACS7
Length: 605
Sequences: 387
Seq/Len: 0.68
I_Prob: 0.00

ALSK - D-allose kinase
Paralog alert: 0.81 [within 20: 0.07] - ratio of genomes with paralogs
Cluster includes: ALSK MAK MLC NAGC NAGK NANK YPHH
RPIR - HTH-type transcriptional regulator RpiR
Paralog alert: 0.77 [within 20: 0.09] - ratio of genomes with paralogs
Cluster includes: HEXR MURR RPIR YFHH
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
244_L 50_I 1.18 0.00
244_L 264_F 1.14 0.00
22_L 208_V 1.12 0.00
153_P 227_S 1.12 0.00
143_M 71_L 1.05 0.00
69_M 56_A 1.04 0.00
18_I 53_V 0.99 0.00
49_I 29_E 0.95 0.00
69_M 32_S 0.94 0.00
49_I 146_L 0.94 0.00
192_A 63_M 0.93 0.00
18_I 148_G 0.92 0.00
242_V 147_Y 0.90 0.00
22_L 264_F 0.89 0.00
153_P 62_A 0.86 0.00
143_M 168_V 0.86 0.00
263_T 157_A 0.85 0.00
147_V 268_V 0.83 0.00
34_K 49_A 0.83 0.00
192_A 207_A 0.83 0.00
167_I 233_A 0.83 0.00
278_F 144_R 0.83 0.00
130_T 218_I 0.82 0.00
76_S 131_I 0.82 0.00
135_L 256_L 0.82 0.00
236_L 141_A 0.82 0.00
219_V 163_F 0.81 0.00
234_I 73_F 0.80 0.00
112_F 119_I 0.80 0.00
230_I 179_M 0.80 0.00
278_F 219_I 0.78 0.00
53_I 147_Y 0.78 0.00
165_G 28_T 0.78 0.00
150_N 85_D 0.78 0.00
192_A 39_L 0.78 0.00
22_L 214_N 0.78 0.00
195_R 78_N 0.77 0.00
244_L 62_A 0.77 0.00
100_D 195_V 0.77 0.00
37_T 197_H 0.77 0.00
281_A 152_S 0.76 0.00
231_A 260_L 0.76 0.00
86_P 111_V 0.76 0.00
151_G 62_A 0.76 0.00
157_A 73_F 0.76 0.00
263_T 65_V 0.75 0.00
150_N 105_Q 0.75 0.00
112_F 158_D 0.75 0.00
119_Q 79_L 0.75 0.00
71_F 119_I 0.75 0.00
117_N 79_L 0.74 0.00
230_I 239_S 0.74 0.00
69_M 230_A 0.74 0.00
212_H 149_A 0.74 0.00
67_L 205_K 0.74 0.00
26_E 63_M 0.73 0.00
242_V 213_K 0.73 0.00
68_V 224_S 0.73 0.00
243_I 158_D 0.73 0.00
206_L 163_F 0.73 0.00
151_G 144_R 0.73 0.00
193_L 68_S 0.73 0.00
107_N 34_I 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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