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OPENSEQ.org

GMM - RFBX
UniProt: P32056 - P37746
Length: 574
Sequences: 337
Seq/Len: 0.61
I_Prob: 0.00

GMM - GDP-mannose mannosyl hydrolase
Paralog alert: 0.65 [within 20: 0.03] - ratio of genomes with paralogs
Cluster includes: GMM MUTT NUDG NUDJ
RFBX - Putative O-antigen transporter
Paralog alert: 0.91 [within 20: 0.17] - ratio of genomes with paralogs
Cluster includes: DINF MDTK MURJ RFBX WZXC WZXE YEEO YGHQ
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
107_F 343_L 1.45 0.00
60_A 91_S 1.34 0.00
31_F 191_L 1.26 0.00
24_V 110_V 1.21 0.00
116_L 24_L 1.17 0.00
115_E 101_I 1.07 0.00
29_G 375_L 1.05 0.00
107_F 225_S 1.03 0.00
115_E 299_L 1.03 0.00
82_Y 253_A 1.02 0.00
71_G 308_L 1.01 0.00
52_V 371_L 1.00 0.00
35_K 287_V 0.99 0.00
57_T 222_I 0.99 0.00
31_F 362_S 0.99 0.00
24_V 39_P 0.98 0.00
42_Q 160_P 0.97 0.00
59_E 318_I 0.97 0.00
33_L 149_L 0.96 0.00
74_L 182_A 0.94 0.00
134_L 384_K 0.94 0.00
24_V 109_L 0.93 0.00
109_F 367_A 0.93 0.00
90_D 400_T 0.92 0.00
61_A 212_R 0.91 0.00
116_L 343_L 0.91 0.00
103_V 123_F 0.91 0.00
26_N 194_V 0.91 0.00
31_F 226_A 0.90 0.00
132_D 218_F 0.90 0.00
31_F 160_P 0.89 0.00
116_L 306_L 0.89 0.00
29_G 333_I 0.89 0.00
74_L 408_R 0.89 0.00
107_F 176_G 0.89 0.00
107_F 51_T 0.88 0.00
60_A 279_L 0.87 0.00
146_A 300_I 0.87 0.00
48_P 387_G 0.87 0.00
128_W 270_A 0.86 0.00
18_V 157_A 0.86 0.00
23_I 393_L 0.85 0.00
82_Y 335_S 0.85 0.00
107_F 295_T 0.85 0.00
132_D 6_L 0.85 0.00
61_A 265_N 0.85 0.00
22_F 401_S 0.85 0.00
125_D 301_G 0.84 0.00
61_A 229_L 0.84 0.00
67_M 149_L 0.84 0.00
84_V 128_V 0.84 0.00
66_T 23_Y 0.84 0.00
66_T 229_L 0.83 0.00
31_F 387_G 0.83 0.00
129_L 13_I 0.83 0.00
122_Q 405_M 0.83 0.00
33_L 47_F 0.82 0.00
84_V 303_A 0.82 0.00
23_I 283_R 0.82 0.00
24_V 15_L 0.82 0.00
67_M 253_A 0.81 0.00
52_V 307_I 0.81 0.00
132_D 316_V 0.81 0.00
108_R 385_E 0.81 0.00
45_W 71_I 0.81 0.00
108_R 256_I 0.80 0.00
60_A 373_L 0.80 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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