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OPENSEQ.org
CBRA - YAFV
UniProt: P31456 - Q47679
Length: 610
Sequences: 487
Seq/Len: 0.83
I_Prob: 0.00
CBRA - Protein CbrA
Paralog alert: 0.83 [within 20: 0.32] - ratio of genomes with paralogs
Cluster includes: CBRA FIXC UBIF UBIH VISC YDIS YGCN 		YAFV - UPF0012 hydrolase YafV
Paralog alert: 0.77 [within 20: 0.06] - ratio of genomes with paralogs
Cluster includes: YAFV YBEM YOBB
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
235_S 38_I 1.32 0.00
141_G 90_V 1.31 0.00
152_V 92_R 1.18 0.00
11_L 217_I 1.06 0.00
164_H 181_A 1.05 0.00
283_L 66_M 1.04 0.00
188_P 64_N 1.03 0.00
154_A 71_Q 0.97 0.00
8_I 28_Q 0.97 0.00
6_V 211_N 0.95 0.00
245_V 128_I 0.94 0.00
128_R 212_P 0.94 0.00
33_K 212_P 0.92 0.00
52_P 98_P 0.89 0.00
89_R 191_C 0.87 0.00
211_Y 38_I 0.87 0.00
98_I 152_N 0.86 0.00
295_I 209_V 0.85 0.00
8_I 135_R 0.82 0.00
26_M 212_P 0.82 0.00
81_V 210_I 0.82 0.00
101_H 92_R 0.82 0.00
152_V 20_A 0.81 0.00
268_A 137_L 0.81 0.00
7_A 136_I 0.80 0.00
310_A 136_I 0.80 0.00
6_V 189_A 0.80 0.00
11_L 215_E 0.80 0.00
271_I 18_G 0.79 0.00
54_A 236_A 0.79 0.00
220_M 140_V 0.79 0.00
31_L 85_T 0.78 0.00
98_I 215_E 0.78 0.00
153_G 216_I 0.78 0.00
148_A 158_L 0.77 0.00
148_A 209_V 0.77 0.00
113_A 218_A 0.77 0.00
304_P 38_I 0.77 0.00
6_V 50_M 0.77 0.00
186_P 216_I 0.77 0.00
316_R 123_G 0.76 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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