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OPENSEQ.org

CBRA - GHRB
UniProt: P31456 - P37666
Length: 678
Sequences: 534
Seq/Len: 0.81
I_Prob: 0.00

CBRA - Protein CbrA
Paralog alert: 0.83 [within 20: 0.32] - ratio of genomes with paralogs
Cluster includes: CBRA FIXC UBIF UBIH VISC YDIS YGCN
GHRB - Glyoxylate/hydroxypyruvate reductase B
Paralog alert: 0.88 [within 20: 0.08] - ratio of genomes with paralogs
Cluster includes: GHRA GHRB LDHD SERA
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
98_I 171_P 1.00 0.00
174_Y 232_F 0.95 0.00
300_L 232_F 0.87 0.00
32_D 4_S 0.86 0.00
58_F 241_V 0.86 0.00
58_F 94_H 0.85 0.00
30_A 43_F 0.83 0.00
11_L 229_S 0.82 0.00
109_S 259_G 0.81 0.00
310_A 256_H 0.81 0.00
149_R 57_N 0.81 0.00
57_S 150_I 0.81 0.00
228_T 60_L 0.78 0.00
268_A 223_F 0.77 0.00
166_Y 203_F 0.77 0.00
8_I 224_A 0.76 0.00
30_A 135_G 0.76 0.00
35_H 108_M 0.76 0.00
34_K 196_T 0.75 0.00
165_L 245_A 0.75 0.00
128_R 112_L 0.75 0.00
162_R 223_F 0.75 0.00
103_F 112_L 0.75 0.00
297_R 220_A 0.74 0.00
11_L 36_V 0.74 0.00
237_F 167_G 0.74 0.00
300_L 303_D 0.74 0.00
22_L 70_T 0.73 0.00
300_L 108_M 0.73 0.00
81_V 171_P 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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