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OPENSEQ.org

RHLE - YBIH
UniProt: P25888 - P0ACU0
Length: 677
Sequences: 394
Seq/Len: 0.67
I_Prob: 0.00

RHLE - ATP-dependent RNA helicase RhlE
Paralog alert: 0.86 [within 20: 0.08] - ratio of genomes with paralogs
Cluster includes: DBPA DEAD RHLB RHLE SRMB
YBIH - Uncharacterized HTH-type transcriptional regulator YbiH
Paralog alert: 0.73 [within 20: 0.12] - ratio of genomes with paralogs
Cluster includes: ACRR BDCR BETI COMR ENVR NEMR RUTR SLMA UIDR YBIH YBJK YJDC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
128_V 131_A 1.11 0.00
250_V 39_A 1.08 0.00
154_V 30_M 1.05 0.00
311_I 204_N 1.04 0.00
128_V 64_Q 1.02 0.00
109_V 65_W 1.01 0.00
208_I 48_I 0.99 0.00
309_L 179_F 0.96 0.00
82_T 48_I 0.93 0.00
221_T 68_D 0.90 0.00
99_S 148_L 0.90 0.00
154_V 44_N 0.90 0.00
288_L 48_I 0.88 0.00
298_V 176_I 0.88 0.00
41_L 143_P 0.87 0.00
39_R 42_G 0.86 0.00
57_L 165_M 0.83 0.00
42_M 172_L 0.82 0.00
300_V 48_I 0.82 0.00
12_I 100_L 0.82 0.00
318_V 64_Q 0.81 0.00
121_K 163_T 0.81 0.00
104_I 72_E 0.81 0.00
61_Q 27_E 0.81 0.00
170_I 34_T 0.81 0.00
203_H 40_Q 0.81 0.00
37_E 86_A 0.81 0.00
172_R 214_I 0.80 0.00
91_I 77_H 0.80 0.00
77_R 62_C 0.80 0.00
76_V 13_A 0.79 0.00
99_S 58_L 0.79 0.00
2_S 57_D 0.78 0.00
105_R 62_C 0.78 0.00
129_L 57_D 0.78 0.00
23_E 30_M 0.78 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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