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OPENSEQ.org

MURG - RSMH
UniProt: P17443 - P60390
Length: 668
Sequences: 980
Seq/Len: 1.50
I_Prob: 0.00

MURG - UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
Paralog alert: 0.39 [within 20: 0.06] - ratio of genomes with paralogs
Cluster includes: MURG
RSMH - Ribosomal RNA small subunit methyltransferase H
Paralog alert: 0.02 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RSMH
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
240_V 112_A 1.16 0.00
198_N 37_H 1.07 0.00
219_G 37_H 1.03 0.00
130_A 281_L 0.97 0.00
327_L 82_L 0.94 0.00
85_R 289_P 0.94 0.00
267_S 310_R 0.93 0.00
325_T 8_T 0.93 0.00
67_G 202_T 0.93 0.00
243_F 72_F 0.90 0.00
67_G 118_F 0.90 0.00
135_K 163_R 0.90 0.00
319_A 289_P 0.87 0.00
83_A 107_P 0.85 0.00
243_F 202_T 0.85 0.00
135_K 146_A 0.84 0.00
243_F 118_F 0.83 0.00
198_N 239_I 0.83 0.00
336_A 310_R 0.82 0.00
128_G 281_L 0.81 0.00
69_G 118_F 0.79 0.00
257_V 283_A 0.79 0.00
316_N 185_E 0.79 0.00
149_P 223_L 0.79 0.00
156_E 310_R 0.79 0.00
240_V 233_G 0.78 0.00
316_N 294_V 0.78 0.00
217_Q 202_T 0.78 0.00
203_Q 147_D 0.78 0.00
258_V 253_M 0.77 0.00
133_T 198_K 0.76 0.00
332_R 300_A 0.75 0.00
128_G 54_I 0.75 0.00
306_Q 143_A 0.75 0.00
22_G 107_P 0.74 0.00
60_I 54_I 0.74 0.00
219_G 239_I 0.74 0.00
70_I 118_F 0.74 0.00
246_D 182_E 0.73 0.00
62_I 161_A 0.73 0.00
267_S 86_V 0.72 0.00
100_L 67_I 0.72 0.00
335_A 238_I 0.72 0.00
40_G 37_H 0.72 0.00
149_P 161_A 0.71 0.00
107_S 152_L 0.71 0.00
306_Q 241_F 0.70 0.00
308_Q 284_L 0.70 0.00
38_W 107_P 0.70 0.00
216_H 199_H 0.70 0.00
29_L 168_I 0.70 0.00
219_G 99_L 0.70 0.00
301_A 154_T 0.69 0.00
174_Q 300_A 0.69 0.00
277_L 292_E 0.69 0.00
277_L 251_R 0.69 0.00
83_A 152_L 0.69 0.00
158_V 83_G 0.68 0.00
271_A 122_G 0.68 0.00
105_Y 208_V 0.68 0.00
31_A 290_G 0.68 0.00
333_A 123_P 0.68 0.00
77_P 186_V 0.68 0.00
202_P 32_F 0.68 0.00
246_D 180_T 0.67 0.00
137_L 27_Y 0.67 0.00
10_V 74_I 0.67 0.00
257_V 75_I 0.67 0.00
251_Y 35_G 0.67 0.00
43_D 305_L 0.67 0.00
138_A 300_A 0.67 0.00
102_M 34_R 0.66 0.00
303_I 154_T 0.66 0.00
27_H 28_I 0.66 0.00
10_V 305_L 0.66 0.00
143_K 74_I 0.66 0.00
11_M 139_W 0.65 0.00
12_A 34_R 0.65 0.00
64_G 56_R 0.65 0.00
38_W 34_R 0.65 0.00
139_K 47_E 0.65 0.00
32_Q 26_I 0.65 0.00
347_N 292_E 0.65 0.00
50_V 37_H 0.65 0.00
334_R 130_P 0.65 0.00
295_L 133_G 0.65 0.00
198_N 129_D 0.65 0.00
68_K 166_R 0.65 0.00
128_G 272_Q 0.64 0.00
150_G 300_A 0.64 0.00
133_T 208_V 0.64 0.00
328_T 62_A 0.64 0.00
318_L 190_A 0.64 0.00
166_V 56_R 0.64 0.00
263_A 219_I 0.64 0.00
38_W 239_I 0.64 0.00
147_A 285_G 0.64 0.00
23_L 37_H 0.64 0.00
208_L 217_E 0.64 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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