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OPENSEQ.org

CYSM - ISPE
UniProt: P16703 - P62615
Length: 586
Sequences: 420
Seq/Len: 0.77
I_Prob: 0.00

CYSM - Cysteine synthase B
Paralog alert: 0.92 [within 20: 0.20] - ratio of genomes with paralogs
Cluster includes: CYSK CYSM DPAL SDHD TDCB TRPB
ISPE - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
Paralog alert: 0.56 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: ISPE KHSE
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
81_A 146_V 1.34 0.00
49_I 127_S 1.29 0.00
288_S 111_A 1.19 0.00
180_T 108_S 1.17 0.00
34_N 41_I 1.17 0.00
54_K 142_V 1.11 0.00
85_Y 157_G 1.08 0.00
111_I 66_L 1.07 0.00
140_Q 119_N 1.06 0.00
149_A 131_L 1.05 0.00
55_R 111_A 1.05 0.00
140_Q 108_S 1.01 0.00
196_V 101_G 1.00 0.00
203_G 108_S 1.00 0.00
122_A 225_V 0.97 0.00
235_R 138_L 0.96 0.00
34_N 113_T 0.96 0.00
84_G 35_L 0.96 0.00
53_E 10_K 0.94 0.00
292_F 41_I 0.94 0.00
282_R 138_L 0.94 0.00
239_N 113_T 0.94 0.00
201_E 108_S 0.93 0.00
109_E 129_D 0.93 0.00
246_V 70_A 0.92 0.00
226_V 65_N 0.92 0.00
129_M 219_F 0.92 0.00
246_V 52_R 0.91 0.00
186_M 229_L 0.90 0.00
122_A 218_R 0.90 0.00
292_F 157_G 0.90 0.00
10_N 100_M 0.90 0.00
290_G 240_T 0.90 0.00
208_G 145_F 0.90 0.00
89_L 66_L 0.89 0.00
111_I 113_T 0.89 0.00
224_S 178_S 0.89 0.00
93_D 161_T 0.89 0.00
131_N 191_P 0.89 0.00
214_T 179_I 0.88 0.00
194_T 93_S 0.88 0.00
93_D 246_A 0.88 0.00
129_M 245_F 0.88 0.00
29_L 117_A 0.87 0.00
131_N 224_A 0.87 0.00
129_M 111_A 0.87 0.00
279_I 39_D 0.87 0.00
236_D 94_I 0.87 0.00
245_A 220_R 0.87 0.00
113_V 237_L 0.86 0.00
65_I 161_T 0.86 0.00
255_S 115_L 0.85 0.00
114_T 209_N 0.85 0.00
206_I 111_A 0.85 0.00
104_R 61_E 0.84 0.00
86_R 119_N 0.84 0.00
227_D 203_L 0.83 0.00
160_Q 171_L 0.83 0.00
233_H 240_T 0.83 0.00
109_E 113_T 0.83 0.00
259_A 82_G 0.82 0.00
227_D 76_K 0.82 0.00
124_D 109_S 0.82 0.00
65_I 74_L 0.82 0.00
63_V 236_R 0.82 0.00
250_I 194_T 0.81 0.00
49_I 76_K 0.81 0.00
198_L 142_V 0.81 0.00
65_I 243_C 0.81 0.00
252_C 66_L 0.81 0.00
132_R 186_K 0.81 0.00
57_E 91_N 0.81 0.00
166_I 204_K 0.80 0.00
47_S 91_N 0.80 0.00
248_E 52_R 0.80 0.00
260_V 63_E 0.80 0.00
91_M 126_L 0.80 0.00
236_D 92_I 0.80 0.00
289_T 115_L 0.80 0.00
75_A 230_L 0.79 0.00
269_A 164_D 0.79 0.00
28_W 119_N 0.79 0.00
275_V 176_G 0.79 0.00
191_K 125_G 0.79 0.00
110_L 179_I 0.79 0.00
198_L 170_Y 0.79 0.00
26_E 191_P 0.79 0.00
260_V 222_V 0.79 0.00
163_G 92_I 0.78 0.00
196_V 153_A 0.78 0.00
258_G 227_S 0.78 0.00
190_S 146_V 0.78 0.00
29_L 153_A 0.78 0.00
34_N 119_N 0.78 0.00
164_G 54_L 0.78 0.00
180_T 234_P 0.78 0.00
104_R 138_L 0.77 0.00
232_I 179_I 0.77 0.00
255_S 98_L 0.77 0.00
229_V 179_I 0.77 0.00
91_M 74_L 0.77 0.00
14_V 96_K 0.77 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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