May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

RIML - TEHB
UniProt: P13857 - P25397
Length: 376
Sequences: 295
Seq/Len: 0.81
I_Prob: 0.00

RIML - Ribosomal-protein-serine acetyltransferase
Paralog alert: 0.87 [within 20: 0.17] - ratio of genomes with paralogs
Cluster includes: ATDA PHNO RIMI RIMJ RIML YAFP YEDL YHHY YIAC YJAB YJGM YNCA YPEA
TEHB - Tellurite methyltransferase
Paralog alert: 0.63 [within 20: 0.03] - ratio of genomes with paralogs
Cluster includes: BIOC CMOA SMTA TAM TEHB UBIE UBIG YAFE YJHP
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
143_Q 125_K 1.32 0.00
47_S 131_L 1.02 0.00
16_V 34_T 1.01 0.00
168_D 160_Y 1.01 0.00
44_F 99_I 0.99 0.00
119_H 164_E 0.86 0.00
35_L 105_L 0.86 0.00
126_E 92_F 0.84 0.00
143_Q 85_V 0.83 0.00
139_P 154_G 0.82 0.00
109_I 96_Y 0.82 0.00
95_E 127_G 0.81 0.00
147_R 126_P 0.80 0.00
138_N 195_R 0.80 0.00
52_R 89_N 0.78 0.00
71_M 162_G 0.78 0.00
72_I 30_K 0.78 0.00
76_D 29_V 0.77 0.00
24_L 54_D 0.76 0.00
140_Q 99_I 0.75 0.00
95_E 131_L 0.73 0.00
105_Q 152_K 0.73 0.00
46_Q 107_F 0.73 0.00
101_D 98_F 0.73 0.00
146_L 114_P 0.72 0.00
58_N 61_N 0.71 0.00
93_T 36_D 0.71 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.4749 seconds.