May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

FUCK - FUCR
UniProt: P11553 - P0ACK8
Length: 725
Sequences: 770
Seq/Len: 1.09
I_Prob: 0.00

FUCK - L-fuculokinase
Paralog alert: 0.74 [within 20: 0.17] - ratio of genomes with paralogs
Cluster includes: ARAB FUCK GLPK LSRK LYXK RHAB XYLB YGCE
FUCR - L-fucose operon activator
Paralog alert: 0.83 [within 20: 0.11] - ratio of genomes with paralogs
Cluster includes: AGAR DEOR FUCR GATR GLPR SGCR SRLR ULAR YCIT YDJF YGBI YIHW
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
468_R 94_G 1.13 0.00
174_I 35_I 0.96 0.00
150_L 23_A 0.95 0.00
389_R 55_A 0.95 0.00
88_A 138_L 0.94 0.00
36_K 78_A 0.92 0.00
178_L 226_V 0.91 0.00
36_K 223_L 0.89 0.00
60_S 151_C 0.89 0.00
426_D 200_A 0.85 0.00
30_A 200_A 0.85 0.00
156_N 112_L 0.84 0.00
193_Q 194_S 0.83 0.00
277_L 120_F 0.82 0.00
75_I 200_A 0.79 0.00
248_S 50_R 0.79 0.00
267_P 94_G 0.79 0.00
163_R 157_L 0.78 0.00
30_A 119_V 0.78 0.00
225_E 119_V 0.78 0.00
455_S 232_D 0.78 0.00
217_F 47_K 0.77 0.00
415_T 91_I 0.77 0.00
114_C 189_N 0.76 0.00
86_G 94_G 0.75 0.00
392_Q 224_D 0.74 0.00
40_R 120_F 0.74 0.00
282_A 171_F 0.74 0.00
236_A 205_L 0.74 0.00
459_A 177_D 0.73 0.00
81_E 209_K 0.73 0.00
453_F 26_E 0.73 0.00
373_G 44_T 0.72 0.00
404_E 48_I 0.72 0.00
105_L 140_S 0.72 0.00
140_G 105_C 0.72 0.00
267_P 209_K 0.72 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0606 seconds.