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OPENSEQ.org

INSD8 - INSJ
UniProt: P0CF60 - P19768
Length: 391
Sequences: 290
Seq/Len: 0.79
I_Prob: 0.00

INSD8 - Putative transposase InsD for insertion element IS2E
Paralog alert: 0.70 [within 20: 0.17] - ratio of genomes with paralogs
Cluster includes: INSD1 INSD2 INSD3 INSD4 INSD5 INSD6 INSD8 INSF1 INSF2 INSF3 INSF4 INSF5 INSK INSO1 INSO2 YAGA
INSJ - Insertion element IS150 uncharacterized 19.7 kDa protein
Paralog alert: 0.35 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: INSJ
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
176_N 91_L 1.38 0.00
157_I 6_Y 1.31 0.00
177_L 96_S 1.23 0.00
66_A 103_V 1.19 0.00
52_E 160_Y 1.12 0.00
175_K 40_R 1.04 0.00
18_L 14_V 1.03 0.00
76_H 86_A 1.02 0.00
4_I 40_R 1.01 0.00
121_R 68_R 1.01 0.00
119_C 74_A 0.99 0.00
9_V 47_E 0.98 0.00
23_K 156_T 0.97 0.00
130_R 96_S 0.97 0.00
85_N 151_V 0.97 0.00
95_G 69_I 0.96 0.00
23_K 165_K 0.96 0.00
145_E 53_G 0.94 0.00
196_R 59_K 0.94 0.00
195_Y 79_H 0.91 0.00
34_T 159_M 0.89 0.00
112_W 64_D 0.89 0.00
18_L 81_S 0.88 0.00
157_I 81_S 0.87 0.00
51_F 155_E 0.86 0.00
61_L 155_E 0.86 0.00
77_W 7_P 0.86 0.00
66_A 33_G 0.86 0.00
21_E 34_V 0.85 0.00
4_I 57_K 0.85 0.00
11_R 11_R 0.85 0.00
53_F 160_Y 0.85 0.00
22_R 3_K 0.84 0.00
148_G 21_T 0.84 0.00
61_L 67_L 0.84 0.00
75_L 122_N 0.83 0.00
168_P 121_R 0.83 0.00
76_H 170_P 0.82 0.00
187_W 10_K 0.82 0.00
167_K 158_L 0.82 0.00
200_E 152_R 0.82 0.00
46_W 28_I 0.81 0.00
196_R 159_M 0.80 0.00
85_N 60_G 0.80 0.00
179_E 33_G 0.80 0.00
31_R 29_S 0.79 0.00
69_C 142_R 0.79 0.00
131_M 113_R 0.79 0.00
194_G 72_V 0.78 0.00
4_I 164_L 0.78 0.00
25_A 149_R 0.78 0.00
131_M 121_R 0.78 0.00
206_A 117_I 0.78 0.00
88_T 68_R 0.78 0.00
50_G 166_A 0.77 0.00
11_R 44_A 0.77 0.00
161_Y 14_V 0.77 0.00
177_L 73_K 0.77 0.00
78_A 34_V 0.77 0.00
122_A 117_I 0.77 0.00
192_A 18_Y 0.76 0.00
16_N 149_R 0.76 0.00
57_N 135_A 0.76 0.00
38_A 130_E 0.76 0.00
97_V 53_G 0.76 0.00
40_K 159_M 0.75 0.00
161_Y 32_F 0.75 0.00
126_R 111_G 0.75 0.00
87_E 88_H 0.75 0.00
60_R 59_K 0.75 0.00
93_M 11_R 0.74 0.00
69_C 164_L 0.74 0.00
74_A 93_G 0.74 0.00
187_W 85_A 0.74 0.00
22_R 72_V 0.74 0.00
75_L 121_R 0.74 0.00
59_E 60_G 0.74 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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