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OPENSEQ.org
HPF - PTSN
UniProt: P0AFX0 - P69829
Length: 258
Sequences: 378
Seq/Len: 1.54
I_Prob: 0.18
HPF - Ribosome hibernation promoting factor
Paralog alert: 0.26 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: HPF RAIA 		PTSN - Nitrogen regulatory protein
Paralog alert: 0.75 [within 20: 0.20] - ratio of genomes with paralogs
Cluster includes: PTFA PTKA PTMA PTSN SGCA ULAC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
17_R 74_G 1.49 0.18
73_A 140_L 1.33 0.12
81_L 69_I 1.31 0.11
40_V 116_Q 1.27 0.10
16_L 54_I 1.26 0.09
38_Y 35_I 1.23 0.09
15_A 43_L 1.21 0.08
75_D 133_D 1.19 0.07
24_F 36_S 1.18 0.07
32_D 128_A 1.17 0.07
9_N 13_V 1.15 0.07
43_V 33_E 1.14 0.06
27_L 35_I 1.14 0.06
37_V 83_A 1.11 0.06
85_L 142_A 1.10 0.06
81_L 18_C 1.07 0.05
22_A 15_N 1.06 0.05
5_I 106_L 1.03 0.04
18_E 145_S 1.02 0.04
5_I 148_E 1.02 0.04
11_E 136_I 1.00 0.04
83_R 65_I 1.00 0.04
20_V 92_T 0.99 0.04
12_I 102_Q 0.99 0.04
28_E 64_G 0.99 0.04
73_A 133_D 0.98 0.04
20_V 54_I 0.97 0.04
21_T 71_I 0.96 0.03
85_L 122_H 0.96 0.03
5_I 32_L 0.96 0.03
30_Y 54_I 0.96 0.03
18_E 156_T 0.95 0.03
93_K 129_K 0.95 0.03
74_I 151_Q 0.95 0.03
40_V 26_Q 0.94 0.03
79_D 107_L 0.94 0.03
9_N 62_S 0.94 0.03
10_V 125_S 0.94 0.03
50_S 133_D 0.94 0.03
61_I 145_S 0.93 0.03
61_I 90_L 0.93 0.03
17_R 71_I 0.93 0.03
16_L 83_A 0.92 0.03
64_S 126_L 0.92 0.03
82_A 75_K 0.91 0.03
57_N 145_S 0.91 0.03
15_A 110_L 0.90 0.03
24_F 149_L 0.90 0.03
3_L 126_L 0.90 0.03
17_R 15_N 0.90 0.03
66_E 71_I 0.89 0.03
24_F 81_L 0.89 0.03
6_T 74_G 0.89 0.03
56_V 88_V 0.89 0.03
73_A 149_L 0.89 0.03
76_G 136_I 0.88 0.03
18_E 151_Q 0.88 0.03
4_N 69_I 0.88 0.03
54_L 101_N 0.87 0.02
23_K 112_V 0.87 0.02
69_D 92_T 0.87 0.02
49_T 19_T 0.86 0.02
34_I 65_I 0.86 0.02
55_H 96_F 0.86 0.02
8_N 65_I 0.86 0.02
95_H 82_R 0.86 0.02
27_L 144_Q 0.86 0.02
66_E 45_L 0.85 0.02
52_A 141_R 0.85 0.02
36_Q 40_A 0.85 0.02
30_Y 75_K 0.85 0.02
22_A 154_T 0.84 0.02
52_A 98_A 0.84 0.02
39_V 64_G 0.84 0.02
59_G 32_L 0.84 0.02
63_A 149_L 0.83 0.02
26_K 10_L 0.83 0.02
85_L 126_L 0.83 0.02
51_D 15_N 0.83 0.02
25_A 77_E 0.83 0.02
9_N 75_K 0.82 0.02
12_I 143_A 0.82 0.02
22_A 146_D 0.82 0.02
40_V 118_K 0.82 0.02
85_L 89_Q 0.82 0.02
58_G 54_I 0.81 0.02
42_K 50_V 0.81 0.02
85_L 95_A 0.81 0.02
26_K 46_P 0.81 0.02
37_V 71_I 0.81 0.02
93_K 39_A 0.80 0.02
65_A 42_Q 0.80 0.02
36_Q 69_I 0.80 0.02
73_A 104_V 0.79 0.02
8_N 106_L 0.79 0.02
34_I 99_I 0.79 0.02
86_T 127_V 0.78 0.02
5_I 35_I 0.77 0.02
40_V 62_S 0.77 0.02
50_S 59_K 0.77 0.02
42_K 74_G 0.77 0.02
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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