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OPENSEQ.org
GYRB - RECF
UniProt: P0AES6 - P0A7H0
Length: 1161
Sequences: 708
Seq/Len: 0.61
I_Prob: 0.00
GYRB - DNA gyrase subunit B
Paralog alert: 0.41 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: GYRB PARE 		RECF - DNA replication and repair protein RecF
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RECF
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
515_Y 332_I 1.41 0.00
282_L 241_D 1.40 0.00
74_D 97_I 1.37 0.00
460_K 216_L 1.30 0.00
257_Q 307_E 1.26 0.00
184_Y 263_A 1.21 0.00
495_I 327_V 1.18 0.00
515_Y 33_G 1.15 0.00
222_I 33_G 1.10 0.00
746_N 185_A 1.10 0.00
225_F 40_L 1.08 0.00
455_K 135_F 1.08 0.00
696_K 188_I 1.07 0.00
386_R 177_W 1.07 0.00
469_T 350_V 1.06 0.00
106_D 14_I 1.05 0.00
201_V 188_I 1.05 0.00
455_K 129_P 1.04 0.00
222_I 279_C 1.04 0.00
799_A 164_A 1.04 0.00
137_E 43_I 1.03 0.00
539_K 279_C 1.01 0.00
412_E 337_V 1.00 0.00
259_N 118_T 1.00 0.00
327_V 127_G 0.99 0.00
93_V 234_L 0.99 0.00
211_G 43_I 0.98 0.00
313_D 240_R 0.98 0.00
397_A 177_W 0.98 0.00
366_T 268_T 0.98 0.00
786_E 242_R 0.98 0.00
130_L 39_V 0.98 0.00
545_Y 247_T 0.97 0.00
527_V 24_G 0.97 0.00
282_L 248_A 0.95 0.00
793_E 313_R 0.95 0.00
793_E 238_F 0.94 0.00
282_L 269_L 0.94 0.00
390_E 185_A 0.94 0.00
399_D 40_L 0.93 0.00
420_L 60_V 0.93 0.00
322_V 163_A 0.92 0.00
360_Y 273_Q 0.92 0.00
283_A 50_R 0.92 0.00
338_D 93_S 0.92 0.00
392_T 14_I 0.92 0.00
443_I 98_D 0.92 0.00
515_Y 239_E 0.92 0.00
325_V 286_G 0.91 0.00
233_K 241_D 0.91 0.00
464_S 127_G 0.91 0.00
216_F 42_A 0.91 0.00
352_Q 245_T 0.91 0.00
352_Q 329_V 0.90 0.00
311_T 355_I 0.90 0.00
481_D 204_A 0.90 0.00
471_I 164_A 0.90 0.00
768_K 196_S 0.90 0.00
778_T 33_G 0.90 0.00
354_N 216_L 0.89 0.00
250_I 159_K 0.89 0.00
282_L 141_F 0.88 0.00
746_N 334_A 0.88 0.00
494_I 47_G 0.88 0.00
313_D 111_L 0.88 0.00
332_F 251_P 0.88 0.00
369_K 56_Q 0.88 0.00
322_V 48_H 0.87 0.00
413_R 333_S 0.87 0.00
89_S 285_Q 0.87 0.00
546_I 131_Y 0.87 0.00
179_V 180_E 0.87 0.00
41_F 108_L 0.87 0.00
360_Y 44_Y 0.87 0.00
80_T 137_D 0.86 0.00
338_D 241_D 0.86 0.00
269_F 354_K 0.86 0.00
241_F 301_I 0.86 0.00
80_T 354_K 0.86 0.00
105_D 34_S 0.86 0.00
497_T 332_I 0.85 0.00
446_L 39_V 0.85 0.00
97_V 26_N 0.85 0.00
422_L 222_R 0.85 0.00
412_E 52_F 0.85 0.00
761_R 53_R 0.85 0.00
48_I 155_K 0.85 0.00
464_S 138_W 0.85 0.00
515_Y 139_G 0.84 0.00
412_E 95_V 0.84 0.00
776_L 253_K 0.84 0.00
789_R 350_V 0.84 0.00
417_L 177_W 0.84 0.00
462_L 244_L 0.84 0.00
145_Y 196_S 0.84 0.00
756_D 206_T 0.84 0.00
90_A 44_Y 0.84 0.00
95_M 21_L 0.84 0.00
226_V 284_A 0.83 0.00
184_Y 313_R 0.83 0.00
360_Y 306_S 0.83 0.00
538_K 241_D 0.83 0.00
161_E 114_M 0.83 0.00
369_K 337_V 0.83 0.00
774_D 281_L 0.83 0.00
522_V 23_P 0.83 0.00
282_L 127_G 0.83 0.00
9_S 266_E 0.82 0.00
78_I 160_Q 0.82 0.00
422_L 176_P 0.82 0.00
474_L 98_D 0.82 0.00
293_L 288_F 0.82 0.00
225_F 46_L 0.82 0.00
462_L 37_T 0.82 0.00
435_G 127_G 0.82 0.00
482_E 64_E 0.82 0.00
48_I 188_I 0.82 0.00
78_I 142_H 0.82 0.00
483_Y 274_L 0.82 0.00
549_D 177_W 0.82 0.00
413_R 166_R 0.82 0.00
258_W 140_C 0.82 0.00
410_C 140_C 0.82 0.00
494_I 144_E 0.82 0.00
320_I 14_I 0.81 0.00
43_V 19_L 0.81 0.00
31_D 138_W 0.81 0.00
761_R 276_L 0.81 0.00
764_R 55_L 0.81 0.00
222_I 4_T 0.81 0.00
270_T 115_Q 0.81 0.00
43_V 328_F 0.81 0.00
43_V 140_C 0.81 0.00
293_L 39_V 0.81 0.00
524_R 156_R 0.81 0.00
681_F 301_I 0.81 0.00
12_V 88_D 0.81 0.00
469_T 47_G 0.81 0.00
345_V 278_M 0.81 0.00
470_L 102_G 0.81 0.00
421_Y 39_V 0.81 0.00
69_V 188_I 0.80 0.00
351_Q 350_V 0.80 0.00
492_S 174_L 0.80 0.00
528_Y 130_K 0.80 0.00
246_E 298_L 0.80 0.00
92_E 74_L 0.80 0.00
536_K 224_W 0.80 0.00
191_L 263_A 0.80 0.00
560_A 273_Q 0.80 0.00
322_V 240_R 0.79 0.00
507_R 112_M 0.79 0.00
259_N 45_T 0.79 0.00
327_V 108_L 0.79 0.00
545_Y 13_N 0.79 0.00
476_C 54_S 0.79 0.00
737_Q 39_V 0.79 0.00
443_I 73_R 0.79 0.00
48_I 48_H 0.79 0.00
513_F 52_F 0.79 0.00
482_E 352_K 0.79 0.00
520_E 84_G 0.79 0.00
177_T 185_A 0.79 0.00
205_L 49_G 0.79 0.00
544_Q 39_V 0.78 0.00
483_Y 253_K 0.78 0.00
422_L 350_V 0.78 0.00
538_K 70_L 0.78 0.00
282_L 265_V 0.78 0.00
195_S 28_L 0.78 0.00
257_Q 117_I 0.78 0.00
549_D 108_L 0.78 0.00
798_K 313_R 0.78 0.00
768_K 188_I 0.78 0.00
240_I 354_K 0.77 0.00
746_N 33_G 0.77 0.00
195_S 52_F 0.77 0.00
225_F 179_K 0.77 0.00
528_Y 159_K 0.77 0.00
240_I 210_F 0.77 0.00
171_P 159_K 0.77 0.00
387_R 350_V 0.77 0.00
420_L 15_E 0.77 0.00
463_S 320_L 0.77 0.00
804_I 225_E 0.77 0.00
755_M 307_E 0.77 0.00
17_D 188_I 0.77 0.00
55_H 183_P 0.77 0.00
230_N 116_L 0.77 0.00
255_A 188_I 0.77 0.00
224_A 60_V 0.77 0.00
94_I 116_L 0.77 0.00
182_F 65_Q 0.77 0.00
225_F 55_L 0.77 0.00
177_T 266_E 0.76 0.00
48_I 328_F 0.76 0.00
231_K 156_R 0.76 0.00
58_E 316_L 0.76 0.00
383_E 56_Q 0.76 0.00
771_I 256_L 0.76 0.00
341_V 207_C 0.76 0.00
145_Y 14_I 0.76 0.00
749_Q 275_K 0.76 0.00
222_I 341_S 0.76 0.00
798_K 195_Y 0.76 0.00
327_V 177_W 0.76 0.00
224_A 195_Y 0.76 0.00
327_V 222_R 0.76 0.00
163_T 97_I 0.76 0.00
416_A 238_F 0.76 0.00
446_L 96_R 0.76 0.00
417_L 234_L 0.76 0.00
494_I 251_P 0.75 0.00
129_K 195_Y 0.75 0.00
174_E 179_K 0.75 0.00
267_Y 253_K 0.75 0.00
763_L 211_L 0.75 0.00
513_F 333_S 0.75 0.00
302_Y 252_H 0.75 0.00
778_T 226_K 0.75 0.00
264_E 266_E 0.75 0.00
41_F 83_I 0.75 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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