| UniProt: | P0AEK7 - P56256 | ||
| Length: | 374 | ||
| Sequences: | 373 | ||
| Seq/Len: | 1.04 | ||
| I_Prob: | 0.00 |
| FDNI - Formate dehydrogenase, nitrate-inducible, cytochrome b556(fdn) subunit
Paralog alert: 0.58 [within 20: 0.02] - ratio of genomes with paralogs Cluster includes: CYBH FDNI FDOI |
YSAA - Putative electron transport protein YsaA Paralog alert: 0.65 [within 20: 0.32] - ratio of genomes with paralogs Cluster includes: DMSB HYCB HYDN HYFA NRFC YDHX YDHY YGFS YNFG YSAA |
Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
| 1kqf | C:B:B:C | Contact Map |
| i | j | Scaled Score | I_Prob |
| 31_S | 43_R | 1.25 | 0.00 |
| 185_E | 11_K | 1.25 | 0.00 |
| 165_A | 145_E | 1.21 | 0.00 |
| 130_T | 73_D | 1.19 | 0.00 |
| 132_V | 27_H | 1.16 | 0.00 |
| 20_T | 110_R | 1.14 | 0.00 |
| 90_L | 115_A | 1.12 | 0.00 |
| 173_A | 87_T | 1.12 | 0.00 |
| 170_M | 20_V | 1.10 | 0.00 |
| 170_M | 102_G | 1.06 | 0.00 |
| 67_A | 77_R | 1.04 | 0.00 |
| 112_G | 90_I | 1.03 | 0.00 |
| 81_P | 85_E | 1.02 | 0.00 |
| 156_A | 72_V | 1.02 | 0.00 |
| 181_K | 79_H | 0.98 | 0.00 |
| 26_F | 145_E | 0.97 | 0.00 |
| 54_R | 135_P | 0.96 | 0.00 |
| 115_M | 129_A | 0.96 | 0.00 |
| 24_C | 73_D | 0.96 | 0.00 |
| 66_V | 149_R | 0.95 | 0.00 |
| 111_A | 103_A | 0.95 | 0.00 |
| 104_A | 11_K | 0.95 | 0.00 |
| 66_V | 145_E | 0.93 | 0.00 |
| 8_V | 152_L | 0.93 | 0.00 |
| 112_G | 93_K | 0.92 | 0.00 |
| 122_S | 62_E | 0.91 | 0.00 |
| 83_K | 88_R | 0.91 | 0.00 |
| 189_S | 32_C | 0.90 | 0.00 |
| 36_F | 108_S | 0.87 | 0.00 |
| 187_K | 67_A | 0.85 | 0.00 |
| 130_T | 111_K | 0.85 | 0.00 |
| 77_H | 149_R | 0.85 | 0.00 |
| 101_H | 85_E | 0.85 | 0.00 |
| 137_P | 139_L | 0.84 | 0.00 |
| 132_V | 149_R | 0.84 | 0.00 |
| 178_G | 136_T | 0.84 | 0.00 |
| 121_M | 34_A | 0.84 | 0.00 |
| 114_K | 93_K | 0.84 | 0.00 |
| 162_L | 37_P | 0.84 | 0.00 |
| 204_I | 110_R | 0.84 | 0.00 |
| 87_P | 145_E | 0.83 | 0.00 |
| 204_I | 102_G | 0.83 | 0.00 |
| 136_R | 77_R | 0.83 | 0.00 |
| 170_M | 120_L | 0.83 | 0.00 |
| 25_F | 94_S | 0.83 | 0.00 |
| 69_M | 34_A | 0.82 | 0.00 |
| 63_A | 106_V | 0.82 | 0.00 |
| 20_T | 45_R | 0.82 | 0.00 |
| 130_T | 110_R | 0.81 | 0.00 |
| 29_A | 63_D | 0.81 | 0.00 |
| 61_G | 13_I | 0.81 | 0.00 |
| 31_S | 9_A | 0.81 | 0.00 |
| 70_F | 103_A | 0.80 | 0.00 |
| 36_F | 103_A | 0.80 | 0.00 |
| 37_F | 110_R | 0.80 | 0.00 |
| 46_T | 17_T | 0.80 | 0.00 |
| 22_V | 103_A | 0.79 | 0.00 |
| 45_Q | 39_E | 0.79 | 0.00 |
| 53_G | 28_E | 0.79 | 0.00 |
Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)
Text file of predictions (includes both intra and inter preds)