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DNAC - YAGA
UniProt: P0AEF0 - P37007
Length: 629
Sequences: 549
Seq/Len: 0.99
I_Prob: 0.00

DNAC - DNA replication protein DnaC
Paralog alert: 0.44 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: DNAC YDAV
YAGA - Uncharacterized protein YagA
Paralog alert: 0.44 [within 20: 0.06] - ratio of genomes with paralogs
Cluster includes: INSD1 INSD2 INSD3 INSD4 INSD5 INSD6 INSD8 INSF1 INSF2 INSF3 INSF4 INSF5 INSK INSO1 INSO2 YAGA
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
102_F 45_Y 1.31 0.00
103_I 346_E 1.23 0.00
186_Q 236_S 1.17 0.00
102_F 105_H 1.12 0.00
202_T 271_Q 1.04 0.00
126_R 38_G 0.97 0.00
188_V 38_G 0.97 0.00
162_N 119_R 0.96 0.00
187_I 264_F 0.95 0.00
100_A 29_N 0.94 0.00
115_L 44_G 0.94 0.00
120_C 155_F 0.94 0.00
73_N 66_P 0.92 0.00
57_F 330_L 0.92 0.00
62_I 19_F 0.91 0.00
236_Y 151_G 0.91 0.00
128_K 27_G 0.90 0.00
60_S 233_V 0.90 0.00
123_L 115_N 0.90 0.00
170_E 146_Q 0.90 0.00
96_D 49_Q 0.90 0.00
110_T 297_S 0.89 0.00
116_A 32_S 0.89 0.00
126_R 368_V 0.89 0.00
124_L 127_S 0.87 0.00
207_E 187_V 0.87 0.00
211_K 210_S 0.87 0.00
51_M 40_S 0.86 0.00
170_E 149_F 0.86 0.00
160_L 146_Q 0.86 0.00
115_L 361_V 0.85 0.00
175_T 359_Y 0.84 0.00
202_T 163_L 0.84 0.00
119_I 84_A 0.84 0.00
101_S 339_A 0.83 0.00
168_I 119_R 0.83 0.00
113_N 202_D 0.83 0.00
96_D 238_P 0.82 0.00
98_N 299_Y 0.82 0.00
224_G 171_R 0.82 0.00
191_R 239_Y 0.81 0.00
48_N 201_P 0.81 0.00
60_S 336_S 0.81 0.00
108_P 239_Y 0.81 0.00
120_C 325_D 0.81 0.00
165_L 262_K 0.81 0.00
49_R 308_G 0.80 0.00
115_L 34_C 0.80 0.00
53_M 87_R 0.80 0.00
199_G 258_V 0.80 0.00
72_E 359_Y 0.80 0.00
119_I 218_T 0.79 0.00
150_G 361_V 0.79 0.00
177_S 345_G 0.79 0.00
85_L 228_R 0.79 0.00
135_V 326_I 0.78 0.00
197_P 222_L 0.78 0.00
117_A 187_V 0.78 0.00
162_N 330_L 0.78 0.00
179_Y 254_L 0.78 0.00
213_L 219_W 0.78 0.00
61_G 266_D 0.78 0.00
89_R 328_G 0.78 0.00
104_F 306_Y 0.78 0.00
165_L 320_M 0.77 0.00
113_N 234_G 0.77 0.00
174_Q 235_H 0.77 0.00
118_A 228_R 0.77 0.00
143_K 222_L 0.77 0.00
124_L 29_N 0.77 0.00
127_G 34_C 0.77 0.00
137_D 220_T 0.77 0.00
144_D 47_W 0.77 0.00
163_V 328_G 0.77 0.00
200_M 102_D 0.76 0.00
126_R 97_K 0.76 0.00
204_S 241_P 0.76 0.00
229_V 46_K 0.76 0.00
119_I 340_G 0.76 0.00
227_L 140_A 0.76 0.00
198_T 266_D 0.76 0.00
162_N 310_T 0.76 0.00
110_T 224_L 0.76 0.00
118_A 370_V 0.76 0.00
122_E 270_L 0.75 0.00
96_D 84_A 0.75 0.00
85_L 45_Y 0.75 0.00
158_N 155_F 0.75 0.00
125_L 351_K 0.75 0.00
184_I 228_R 0.75 0.00
234_D 326_I 0.75 0.00
139_M 330_L 0.75 0.00
71_F 356_D 0.75 0.00
202_T 273_A 0.75 0.00
130_V 323_K 0.75 0.00
132_I 274_F 0.74 0.00
234_D 370_V 0.74 0.00
166_L 262_K 0.74 0.00
57_F 38_G 0.74 0.00
114_H 54_E 0.74 0.00
221_M 219_W 0.74 0.00
95_F 41_P 0.74 0.00
58_N 98_R 0.74 0.00
82_M 81_L 0.74 0.00
182_V 258_V 0.74 0.00
199_G 80_L 0.73 0.00
116_A 105_H 0.73 0.00
166_L 310_T 0.73 0.00
115_L 159_R 0.73 0.00
190_R 201_P 0.73 0.00
135_V 181_D 0.73 0.00
110_T 118_A 0.73 0.00
60_S 44_G 0.73 0.00
170_E 302_S 0.73 0.00
127_G 369_G 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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