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OPENSEQ.org
DAPE - PYRB
UniProt: P0AED7 - P0A786
Length: 686
Sequences: 539
Seq/Len: 0.80
I_Prob: 0.00
DAPE - Succinyl-diaminopimelate desuccinylase
Paralog alert: 0.89 [within 20: 0.19] - ratio of genomes with paralogs
Cluster includes: ABGA ABGB ALLC ARGE DAPE PEPT YGEY 		PYRB - Aspartate carbamoyltransferase catalytic chain
Paralog alert: 0.85 [within 20: 0.11] - ratio of genomes with paralogs
Cluster includes: OTC1 OTC2 PYRB YGEW
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
214_L 125_V 1.17 0.00
351_N 215_S 1.06 0.00
108_V 178_A 1.03 0.00
359_L 19_D 0.97 0.00
125_L 180_F 0.95 0.00
116_A 17_S 0.93 0.00
345_A 289_Q 0.92 0.00
283_T 21_L 0.92 0.00
197_P 139_T 0.92 0.00
273_A 48_C 0.92 0.00
349_K 125_V 0.92 0.00
61_L 248_F 0.91 0.00
173_V 198_Y 0.89 0.00
356_A 8_K 0.88 0.00
210_F 139_T 0.88 0.00
61_L 210_W 0.88 0.00
211_L 199_I 0.85 0.00
232_Q 48_C 0.85 0.00
256_F 278_V 0.85 0.00
207_A 52_A 0.81 0.00
204_V 251_R 0.81 0.00
90_G 299_A 0.80 0.00
154_R 125_V 0.80 0.00
93_F 301_L 0.79 0.00
245_V 61_E 0.79 0.00
363_A 146_I 0.78 0.00
87_I 11_I 0.78 0.00
284_V 263_K 0.78 0.00
63_F 301_L 0.78 0.00
61_L 102_A 0.78 0.00
30_I 265_L 0.77 0.00
61_L 125_V 0.76 0.00
213_E 253_S 0.76 0.00
286_W 185_F 0.76 0.00
110_A 193_L 0.76 0.00
292_P 125_V 0.76 0.00
37_G 17_S 0.75 0.00
188_H 127_N 0.75 0.00
313_E 144_F 0.74 0.00
273_A 210_W 0.74 0.00
35_A 246_A 0.74 0.00
250_L 180_F 0.74 0.00
311_Y 265_L 0.74 0.00
41_E 71_V 0.74 0.00
214_L 19_D 0.73 0.00
95_R 54_T 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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