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OPENSEQ.org

BCP - PERM
UniProt: P0AE52 - P0AFI9
Length: 509
Sequences: 398
Seq/Len: 0.79
I_Prob: 0.00

BCP - Putative peroxiredoxin bcp
Paralog alert: 0.88 [within 20: 0.10] - ratio of genomes with paralogs
Cluster includes: AHPC BCP DSBE TPX
PERM - Putative permease PerM
Paralog alert: 0.79 [within 20: 0.03] - ratio of genomes with paralogs
Cluster includes: PERM TQSA YDIK YHHT
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
104_G 201_V 1.30 0.00
149_L 307_L 1.25 0.00
131_K 72_I 1.12 0.00
35_V 74_L 1.03 0.00
13_F 130_I 0.97 0.00
35_V 63_G 0.92 0.00
134_H 45_A 0.91 0.00
72_T 240_L 0.91 0.00
74_K 73_V 0.90 0.00
10_A 91_I 0.89 0.00
34_L 83_L 0.88 0.00
53_L 69_A 0.88 0.00
92_L 148_V 0.87 0.00
98_Q 172_M 0.87 0.00
92_L 279_W 0.85 0.00
132_I 176_L 0.85 0.00
92_L 66_R 0.85 0.00
64_G 233_L 0.84 0.00
29_Q 75_V 0.84 0.00
132_I 296_L 0.84 0.00
14_S 240_L 0.84 0.00
132_I 251_L 0.83 0.00
87_L 43_L 0.82 0.00
82_A 89_L 0.82 0.00
64_G 342_I 0.82 0.00
132_I 201_V 0.82 0.00
24_N 233_L 0.81 0.00
67_V 160_L 0.81 0.00
104_G 75_V 0.81 0.00
22_Q 295_L 0.81 0.00
27_D 251_L 0.81 0.00
35_V 281_C 0.81 0.00
67_V 96_G 0.81 0.00
125_L 167_V 0.80 0.00
70_I 227_T 0.79 0.00
126_I 166_L 0.79 0.00
80_R 140_R 0.79 0.00
149_L 330_F 0.78 0.00
58_D 166_L 0.78 0.00
31_Q 252_I 0.78 0.00
27_D 148_V 0.78 0.00
55_D 168_L 0.78 0.00
7_G 329_F 0.78 0.00
80_R 201_V 0.78 0.00
105_V 255_I 0.77 0.00
86_L 225_I 0.77 0.00
93_S 83_L 0.77 0.00
89_F 303_E 0.77 0.00
129_D 114_A 0.77 0.00
6_A 89_L 0.77 0.00
31_Q 158_G 0.77 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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