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OPENSEQ.org

AMPE - HIS8
UniProt: P0AE14 - P06986
Length: 640
Sequences: 747
Seq/Len: 1.25
I_Prob: 0.01

AMPE - Protein AmpE
Paralog alert: 0.20 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: AMPE
HIS8 - Histidinol-phosphate aminotransferase
Paralog alert: 0.93 [within 20: 0.27] - ratio of genomes with paralogs
Cluster includes: AAT ALAA ALAC ARNB AVTA CSDA HIS8 ISCS MALY RFFA SERC SUFS TYRB YBDL YDCR YJIR
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
35_V 310_V 1.32 0.01
203_L 257_L 1.17 0.01
101_N 351_L 1.12 0.00
80_L 186_A 1.02 0.00
121_A 225_F 1.00 0.00
206_V 258_S 0.94 0.00
233_Y 167_D 0.91 0.00
29_E 112_M 0.91 0.00
234_Q 211_T 0.90 0.00
28_L 233_I 0.88 0.00
266_T 308_S 0.88 0.00
121_A 106_C 0.87 0.00
219_P 121_G 0.87 0.00
137_L 221_L 0.87 0.00
76_L 321_L 0.87 0.00
86_K 151_Y 0.86 0.00
11_I 341_R 0.86 0.00
153_V 272_I 0.85 0.00
198_W 343_E 0.85 0.00
28_L 79_L 0.85 0.00
11_I 319_I 0.84 0.00
118_G 57_E 0.83 0.00
31_F 238_K 0.82 0.00
13_E 27_G 0.81 0.00
258_A 121_G 0.81 0.00
259_A 194_A 0.80 0.00
91_Y 212_L 0.80 0.00
136_L 300_I 0.80 0.00
117_H 221_L 0.80 0.00
41_G 267_E 0.80 0.00
191_A 352_R 0.80 0.00
72_L 138_Q 0.80 0.00
240_A 36_A 0.80 0.00
15_L 123_E 0.80 0.00
68_V 150_V 0.80 0.00
224_S 57_E 0.80 0.00
91_Y 186_A 0.79 0.00
90_H 92_I 0.79 0.00
82_I 230_E 0.79 0.00
15_L 164_N 0.79 0.00
96_T 207_A 0.79 0.00
52_G 231_E 0.79 0.00
195_V 93_R 0.78 0.00
145_L 331_S 0.78 0.00
177_R 205_H 0.78 0.00
110_A 57_E 0.78 0.00
238_R 173_E 0.78 0.00
181_P 78_V 0.78 0.00
235_V 186_A 0.77 0.00
179_Q 119_T 0.77 0.00
188_G 157_N 0.77 0.00
144_Y 204_P 0.77 0.00
136_L 287_P 0.77 0.00
259_A 209_L 0.77 0.00
273_V 164_N 0.77 0.00
193_L 243_Y 0.77 0.00
28_L 81_S 0.76 0.00
111_G 189_E 0.76 0.00
195_V 65_E 0.76 0.00
195_V 67_Y 0.76 0.00
82_I 336_I 0.76 0.00
26_H 88_I 0.76 0.00
255_T 98_P 0.76 0.00
233_Y 338_V 0.76 0.00
234_Q 334_L 0.76 0.00
252_K 183_A 0.75 0.00
205_G 122_V 0.75 0.00
260_V 182_V 0.75 0.00
9_V 111_G 0.75 0.00
90_H 110_Y 0.75 0.00
238_R 150_V 0.75 0.00
260_V 90_L 0.75 0.00
57_L 144_L 0.74 0.00
45_G 275_E 0.74 0.00
48_I 196_L 0.74 0.00
203_L 316_D 0.74 0.00
81_C 87_G 0.74 0.00
218_L 353_A 0.74 0.00
117_H 121_G 0.74 0.00
270_V 152_V 0.74 0.00
140_N 117_A 0.74 0.00
242_F 321_L 0.74 0.00
158_G 216_F 0.74 0.00
268_F 140_I 0.73 0.00
119_V 336_I 0.73 0.00
196_L 289_V 0.73 0.00
150_W 298_N 0.73 0.00
133_Q 299_Y 0.73 0.00
126_R 284_K 0.73 0.00
178_Y 212_L 0.73 0.00
189_I 186_A 0.73 0.00
106_R 245_L 0.73 0.00
153_V 319_I 0.72 0.00
86_K 228_A 0.72 0.00
230_T 56_P 0.72 0.00
178_Y 154_S 0.72 0.00
156_T 111_G 0.72 0.00
204_A 39_Y 0.72 0.00
219_P 314_L 0.72 0.00
173_Y 112_M 0.72 0.00
58_L 208_I 0.71 0.00
241_Q 245_L 0.71 0.00
131_E 85_D 0.71 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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