| UniProt: | P0AD01 - P0AEC8 | ||
| Length: | 782 | ||
| Sequences: | 925 | ||
| Seq/Len: | 1.24 | ||
| I_Prob: | 0.00 |
| DCUR - Transcriptional regulatory protein DcuR
Paralog alert: 0.84 [within 20: 0.18] - ratio of genomes with paralogs Cluster includes: ARCA BAER BASR BGLJ CPXR CREB CSGD CUSR DCUR DPIA EVGA FIMZ KDPE NARL NARP OMPR PHOB PHOP QSEB RCSB RSTA TORR UHPA UVRY YEDW YGEK YHJB |
DCUS - Sensor histidine kinase DcuS Paralog alert: 0.79 [within 20: 0.06] - ratio of genomes with paralogs Cluster includes: ATOS BAES BASS CPXA CREC CUSS DCUS DPIB ENVZ GLRK NTRB PHOQ PHOR QSEC RSTB YEDV ZRAS |
Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
| 4hh3 | AB:AB:C | Contact Map |
| i | j | Scaled Score | I_Prob |
| 7_I | 438_T | 1.25 | 0.00 |
| 53_I | 376_K | 1.21 | 0.00 |
| 16_L | 360_G | 1.13 | 0.00 |
| 6_I | 98_I | 1.10 | 0.00 |
| 14_A | 444_E | 1.07 | 0.00 |
| 13_V | 360_G | 1.02 | 0.00 |
| 83_I | 17_L | 1.02 | 0.00 |
| 102_D | 136_A | 1.02 | 0.00 |
| 13_V | 377_T | 1.02 | 0.00 |
| 77_K | 458_I | 1.02 | 0.00 |
| 84_S | 303_I | 1.00 | 0.00 |
| 54_L | 151_P | 0.99 | 0.00 |
| 35_T | 532_V | 0.98 | 0.00 |
| 40_K | 16_K | 0.97 | 0.00 |
| 197_K | 370_L | 0.95 | 0.00 |
| 80_V | 443_I | 0.93 | 0.00 |
| 13_V | 356_H | 0.92 | 0.00 |
| 88_D | 443_I | 0.92 | 0.00 |
| 178_E | 17_L | 0.92 | 0.00 |
| 54_L | 220_L | 0.92 | 0.00 |
| 92_I | 439_L | 0.92 | 0.00 |
| 140_Q | 460_V | 0.91 | 0.00 |
| 43_I | 498_S | 0.91 | 0.00 |
| 39_A | 254_L | 0.90 | 0.00 |
| 13_V | 391_K | 0.90 | 0.00 |
| 18_R | 473_V | 0.89 | 0.00 |
| 20_Y | 364_L | 0.88 | 0.00 |
| 180_S | 146_L | 0.87 | 0.00 |
| 22_A | 372_D | 0.87 | 0.00 |
| 185_A | 348_S | 0.86 | 0.00 |
| 194_S | 370_L | 0.86 | 0.00 |
| 7_I | 253_E | 0.86 | 0.00 |
| 217_T | 49_R | 0.86 | 0.00 |
| 53_I | 530_F | 0.85 | 0.00 |
| 3_N | 511_V | 0.85 | 0.00 |
| 208_L | 29_L | 0.85 | 0.00 |
| 71_L | 284_R | 0.85 | 0.00 |
| 10_D | 79_E | 0.85 | 0.00 |
| 185_A | 93_N | 0.84 | 0.00 |
| 4_V | 368_K | 0.83 | 0.00 |
| 20_Y | 359_L | 0.83 | 0.00 |
| 17_N | 341_A | 0.82 | 0.00 |
| 38_K | 417_L | 0.82 | 0.00 |
| 117_L | 370_L | 0.82 | 0.00 |
| 82_V | 145_A | 0.81 | 0.00 |
| 177_Y | 458_I | 0.81 | 0.00 |
| 167_L | 72_G | 0.81 | 0.00 |
| 73_N | 473_V | 0.81 | 0.00 |
| 108_F | 343_A | 0.81 | 0.00 |
| 38_K | 414_T | 0.81 | 0.00 |
| 84_S | 502_V | 0.80 | 0.00 |
| 66_D | 330_L | 0.80 | 0.00 |
| 124_K | 399_G | 0.80 | 0.00 |
| 198_Y | 404_K | 0.80 | 0.00 |
| 184_L | 62_T | 0.80 | 0.00 |
| 190_I | 355_L | 0.79 | 0.00 |
| 142_I | 39_I | 0.79 | 0.00 |
| 138_L | 165_I | 0.79 | 0.00 |
| 40_K | 483_D | 0.78 | 0.00 |
| 135_Q | 410_D | 0.78 | 0.00 |
| 193_V | 149_F | 0.78 | 0.00 |
| 53_I | 144_Q | 0.78 | 0.00 |
| 81_I | 443_I | 0.77 | 0.00 |
| 82_V | 535_P | 0.77 | 0.00 |
| 103_Y | 350_E | 0.77 | 0.00 |
| 98_Y | 31_S | 0.77 | 0.00 |
| 95_S | 230_S | 0.77 | 0.00 |
| 6_I | 26_S | 0.76 | 0.00 |
| 3_N | 207_K | 0.76 | 0.00 |
| 5_L | 530_F | 0.76 | 0.00 |
| 74_A | 439_L | 0.76 | 0.00 |
| 68_L | 135_V | 0.76 | 0.00 |
| 46_S | 530_F | 0.76 | 0.00 |
| 80_V | 403_S | 0.75 | 0.00 |
| 184_L | 72_G | 0.75 | 0.00 |
| 6_I | 260_S | 0.75 | 0.00 |
| 85_S | 213_E | 0.75 | 0.00 |
| 196_R | 146_L | 0.75 | 0.00 |
| 192_R | 344_L | 0.74 | 0.00 |
| 93_K | 353_N | 0.74 | 0.00 |
| 226_I | 189_F | 0.74 | 0.00 |
| 45_N | 471_C | 0.74 | 0.00 |
| 8_D | 230_S | 0.74 | 0.00 |
| 5_L | 489_F | 0.74 | 0.00 |
| 196_R | 316_G | 0.73 | 0.00 |
| 209_F | 236_V | 0.73 | 0.00 |
Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)
Text file of predictions (includes both intra and inter preds)