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OPENSEQ.org

DEOR - YBJI
UniProt: P0ACK5 - P75809
Length: 523
Sequences: 435
Seq/Len: 0.85
I_Prob: 0.00

DEOR - Deoxyribose operon repressor
Paralog alert: 0.83 [within 20: 0.11] - ratio of genomes with paralogs
Cluster includes: AGAR DEOR FUCR GATR GLPR SGCR SRLR ULAR YCIT YDJF YGBI YIHW
YBJI - Flavin mononucleotide phosphatase YbjI
Paralog alert: 0.75 [within 20: 0.18] - ratio of genomes with paralogs
Cluster includes: COF MPGP SUPH YBHA YBJI YIDA YIGL
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
207_V 226_A 0.97 0.00
31_L 237_S 0.97 0.00
124_L 185_L 0.92 0.00
200_A 20_T 0.87 0.00
22_L 33_M 0.87 0.00
210_S 210_V 0.85 0.00
172_S 76_G 0.84 0.00
85_L 34_K 0.84 0.00
220_M 42_V 0.83 0.00
94_Q 241_A 0.83 0.00
92_P 91_T 0.81 0.00
251_M 252_R 0.81 0.00
107_I 226_A 0.80 0.00
96_L 238_A 0.80 0.00
175_G 68_N 0.78 0.00
111_I 238_A 0.77 0.00
110_A 235_A 0.76 0.00
153_K 244_K 0.76 0.00
90_V 185_L 0.76 0.00
16_L 147_F 0.75 0.00
230_V 16_S 0.74 0.00
222_D 206_D 0.74 0.00
111_I 257_D 0.74 0.00
22_L 208_S 0.73 0.00
205_L 84_L 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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