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OPENSEQ.org

LRP - SERC
UniProt: P0ACJ0 - P23721
Length: 526
Sequences: 546
Seq/Len: 1.07
I_Prob: 0.00

LRP - Leucine-responsive regulatory protein
Paralog alert: 0.82 [within 20: 0.12] - ratio of genomes with paralogs
Cluster includes: ASNC LRP YBAO
SERC - Phosphoserine aminotransferase
Paralog alert: 0.94 [within 20: 0.15] - ratio of genomes with paralogs
Cluster includes: AAT ALAA ALAC ARNB AVTA CSDA HIS8 ISCS MALY RFFA SERC SUFS TYRB YBDL YDCR YJIR
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
26_D 169_V 1.25 0.00
119_T 359_R 1.11 0.00
65_L 158_A 1.05 0.00
51_R 213_D 1.02 0.00
99_K 119_F 0.99 0.00
78_V 71_F 0.97 0.00
119_T 62_N 0.97 0.00
20_L 69_V 0.95 0.00
78_V 169_V 0.94 0.00
26_D 332_G 0.94 0.00
20_L 23_Q 0.92 0.00
19_I 52_E 0.92 0.00
69_Y 65_S 0.90 0.00
57_F 194_A 0.88 0.00
66_N 168_D 0.87 0.00
19_I 322_L 0.85 0.00
35_S 176_S 0.84 0.00
28_R 254_K 0.83 0.00
12_L 212_E 0.83 0.00
12_L 87_I 0.82 0.00
138_L 147_H 0.81 0.00
20_L 319_A 0.80 0.00
69_Y 352_D 0.79 0.00
148_V 137_W 0.79 0.00
66_N 52_E 0.79 0.00
12_L 192_I 0.79 0.00
103_I 93_T 0.79 0.00
36_K 352_D 0.79 0.00
106_C 50_A 0.78 0.00
76_V 304_L 0.77 0.00
148_V 182_R 0.76 0.00
19_I 139_L 0.76 0.00
36_K 185_D 0.76 0.00
52_L 69_V 0.75 0.00
76_V 347_V 0.75 0.00
63_A 119_F 0.75 0.00
78_V 87_I 0.75 0.00
61_Y 77_R 0.75 0.00
119_T 57_F 0.74 0.00
105_E 84_P 0.74 0.00
103_I 227_D 0.74 0.00
100_L 206_T 0.74 0.00
19_I 131_V 0.74 0.00
20_L 83_V 0.74 0.00
82_L 57_F 0.74 0.00
159_L 234_N 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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