May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

ASNC - RBSK
UniProt: P0ACI6 - P0A9J6
Length: 461
Sequences: 435
Seq/Len: 0.97
I_Prob: 0.00

ASNC - Regulatory protein AsnC
Paralog alert: 0.82 [within 20: 0.14] - ratio of genomes with paralogs
Cluster includes: ASNC LRP YBAO
RBSK - Ribokinase
Paralog alert: 0.85 [within 20: 0.18] - ratio of genomes with paralogs
Cluster includes: FRLD K1PF K6PF2 KDGK PSUK RBSK YDJH YEGV YEII YIHV
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
61_P 82_I 0.94 0.00
68_V 102_V 0.94 0.00
115_S 164_A 0.93 0.00
9_L 259_G 0.90 0.00
14_L 125_V 0.86 0.00
24_A 77_L 0.84 0.00
19_G 66_D 0.84 0.00
20_N 273_E 0.81 0.00
6_I 176_E 0.81 0.00
24_A 145_P 0.80 0.00
127_I 139_L 0.79 0.00
43_V 126_E 0.79 0.00
12_G 61_I 0.78 0.00
8_N 191_A 0.78 0.00
29_A 152_A 0.78 0.00
60_S 7_L 0.77 0.00
51_I 265_L 0.76 0.00
122_V 214_E 0.76 0.00
115_S 178_L 0.75 0.00
113_C 222_I 0.74 0.00
102_T 58_I 0.74 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0332 seconds.