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OPENSEQ.org

PRMC - YCIO
UniProt: P0ACC1 - P0AFR4
Length: 483
Sequences: 547
Seq/Len: 1.15
I_Prob: 0.02

PRMC - Release factor glutamine methyltransferase
Paralog alert: 0.37 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: PRMB PRMC TRMN6
YCIO - Uncharacterized protein YciO
Paralog alert: 0.53 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: RIMN YCIO
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
161_I 118_T 1.43 0.02
151_R 87_R 1.07 0.01
220_I 199_V 1.02 0.01
66_E 79_S 0.98 0.01
239_G 98_T 0.98 0.01
123_I 51_E 0.95 0.01
179_M 132_L 0.94 0.01
2_E 171_I 0.94 0.01
141_R 179_Q 0.93 0.00
67_P 149_G 0.93 0.00
200_R 147_L 0.93 0.00
262_R 158_E 0.92 0.00
218_V 98_T 0.92 0.00
130_E 120_G 0.91 0.00
207_L 24_V 0.91 0.00
196_Q 141_L 0.90 0.00
117_G 78_Y 0.89 0.00
198_D 36_S 0.89 0.00
208_V 71_D 0.89 0.00
244_E 125_S 0.89 0.00
71_L 48_N 0.87 0.00
99_V 98_T 0.87 0.00
202_E 78_Y 0.87 0.00
123_I 98_T 0.86 0.00
140_D 114_E 0.86 0.00
77_F 39_A 0.84 0.00
141_R 133_L 0.84 0.00
67_P 123_V 0.84 0.00
178_A 118_T 0.84 0.00
242_Q 130_Q 0.83 0.00
117_G 111_L 0.83 0.00
198_D 148_P 0.83 0.00
187_I 75_L 0.83 0.00
266_D 193_V 0.83 0.00
6_W 99_F 0.82 0.00
29_E 29_V 0.82 0.00
225_R 53_I 0.82 0.00
148_L 32_Y 0.81 0.00
137_I 73_S 0.81 0.00
235_L 53_I 0.81 0.00
223_Q 205_F 0.81 0.00
116_L 137_G 0.81 0.00
136_I 67_L 0.81 0.00
88_T 81_V 0.80 0.00
271_T 148_P 0.80 0.00
164_L 167_Q 0.80 0.00
108_E 105_K 0.80 0.00
252_L 90_K 0.80 0.00
110_P 143_T 0.80 0.00
165_Q 17_I 0.79 0.00
125_L 158_E 0.79 0.00
140_D 66_T 0.78 0.00
207_L 140_M 0.78 0.00
94_D 107_V 0.78 0.00
79_S 101_L 0.78 0.00
116_L 164_L 0.77 0.00
217_I 143_T 0.77 0.00
238_H 143_T 0.77 0.00
197_G 141_L 0.77 0.00
54_Q 121_M 0.76 0.00
67_P 71_D 0.76 0.00
136_I 130_Q 0.76 0.00
138_A 120_G 0.76 0.00
209_A 19_Q 0.76 0.00
60_T 205_F 0.76 0.00
88_T 97_Y 0.75 0.00
127_L 26_K 0.75 0.00
239_G 35_D 0.74 0.00
27_L 99_F 0.74 0.00
27_L 58_Q 0.74 0.00
99_V 205_F 0.74 0.00
102_A 99_F 0.73 0.00
7_L 187_L 0.73 0.00
42_F 69_C 0.73 0.00
166_S 102_K 0.73 0.00
39_I 176_Y 0.73 0.00
136_I 149_G 0.72 0.00
258_V 192_P 0.72 0.00
242_Q 101_L 0.72 0.00
123_I 158_E 0.72 0.00
241_Q 100_I 0.72 0.00
79_S 41_G 0.72 0.00
187_I 24_V 0.72 0.00
194_L 107_V 0.72 0.00
257_D 177_L 0.72 0.00
264_Y 176_Y 0.72 0.00
78_W 103_G 0.72 0.00
89_L 143_T 0.71 0.00
36_R 53_I 0.71 0.00
129_S 29_V 0.71 0.00
98_L 24_V 0.71 0.00
72_T 173_H 0.71 0.00
132_P 139_P 0.71 0.00
172_L 188_T 0.71 0.00
207_L 42_C 0.71 0.00
93_P 126_N 0.71 0.00
53_Q 190_D 0.71 0.00
89_L 35_D 0.71 0.00
71_L 121_M 0.70 0.00
55_L 75_L 0.70 0.00
198_D 50_M 0.70 0.00
81_P 156_D 0.70 0.00
60_T 131_A 0.70 0.00
107_P 172_I 0.70 0.00
242_Q 205_F 0.69 0.00
71_L 200_G 0.69 0.00
64_D 81_V 0.69 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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