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OPENSEQ.org

MENB - MENC
UniProt: P0ABU0 - P29208
Length: 605
Sequences: 516
Seq/Len: 0.90
I_Prob: 0.00

MENB - 1,4-Dihydroxy-2-naphthoyl-CoA synthase
Paralog alert: 0.65 [within 20: 0.21] - ratio of genomes with paralogs
Cluster includes: CAID MENB PAAF PAAG SCPB
MENC - o-succinylbenzoate synthase
Paralog alert: 0.56 [within 20: 0.15] - ratio of genomes with paralogs
Cluster includes: AEEP DGOD GUDD GUDX MENC RHMD RSPA
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
123_V 89_C 0.99 0.00
175_V 210_I 0.99 0.00
69_I 209_A 0.96 0.00
260_T 261_I 0.93 0.00
123_V 31_Y 0.91 0.00
26_R 16_G 0.85 0.00
185_F 87_V 0.85 0.00
248_E 86_G 0.84 0.00
160_G 87_V 0.83 0.00
187_C 225_A 0.83 0.00
198_M 156_L 0.82 0.00
168_A 59_A 0.82 0.00
206_P 158_L 0.81 0.00
269_A 267_S 0.81 0.00
75_T 94_L 0.80 0.00
73_I 224_V 0.80 0.00
37_I 197_D 0.78 0.00
238_A 246_R 0.78 0.00
14_E 92_A 0.78 0.00
158_K 181_D 0.77 0.00
150_A 90_A 0.77 0.00
75_T 71_L 0.77 0.00
140_M 11_I 0.77 0.00
123_V 139_A 0.76 0.00
52_T 282_T 0.75 0.00
145_I 180_P 0.75 0.00
257_F 210_I 0.75 0.00
126_V 250_Q 0.75 0.00
73_I 37_G 0.74 0.00
30_S 210_I 0.74 0.00
95_G 153_I 0.73 0.00
133_G 161_D 0.73 0.00
209_D 173_Q 0.73 0.00
188_R 109_L 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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