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OPENSEQ.org

CDSA - PYRH
UniProt: P0ABG1 - P0A7E9
Length: 526
Sequences: 960
Seq/Len: 1.90
I_Prob: 0.01

CDSA - Phosphatidate cytidylyltransferase
Paralog alert: 0.03 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: CDSA YNBB
PYRH - Uridylate kinase
Paralog alert: 0.90 [within 20: 0.10] - ratio of genomes with paralogs
Cluster includes: PYRH
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
191_Q 236_G 1.19 0.01
222_I 39_Q 1.15 0.01
223_C 187_L 1.11 0.01
177_K 183_M 1.06 0.01
238_E 64_A 1.06 0.01
238_E 31_A 1.03 0.01
250_S 60_L 0.96 0.01
168_A 20_A 0.96 0.01
177_K 236_G 0.94 0.01
171_F 191_E 0.93 0.01
60_V 230_V 0.92 0.01
260_I 214_P 0.92 0.01
199_T 239_I 0.91 0.01
97_I 173_A 0.91 0.01
240_M 226_L 0.91 0.01
261_L 82_L 0.91 0.01
222_I 229_V 0.90 0.01
178_H 236_G 0.90 0.01
162_W 154_I 0.90 0.01
201_A 239_I 0.90 0.01
278_L 229_V 0.90 0.01
28_F 36_R 0.89 0.01
189_T 40_E 0.88 0.01
194_I 212_K 0.88 0.01
260_I 185_E 0.87 0.01
39_A 236_G 0.87 0.01
15_V 27_F 0.87 0.01
150_G 30_D 0.87 0.01
123_F 188_T 0.87 0.01
130_P 64_A 0.87 0.01
41_W 238_L 0.87 0.01
207_Y 8_V 0.86 0.01
170_M 75_V 0.86 0.01
169_Y 196_E 0.86 0.01
233_L 16_L 0.86 0.01
39_A 93_D 0.85 0.01
6_L 51_V 0.85 0.01
240_M 216_R 0.83 0.01
187_G 158_A 0.83 0.01
122_I 212_K 0.83 0.01
43_W 106_S 0.82 0.01
266_S 111_N 0.82 0.01
151_A 159_D 0.82 0.01
21_F 235_E 0.82 0.01
266_S 236_G 0.81 0.01
197_L 159_D 0.81 0.01
187_G 205_F 0.81 0.01
168_A 150_C 0.81 0.01
163_G 123_I 0.81 0.00
150_G 53_V 0.81 0.00
174_L 188_T 0.81 0.00
187_G 29_I 0.80 0.00
21_F 238_L 0.80 0.00
5_R 151_L 0.80 0.00
189_T 111_N 0.79 0.00
92_S 195_K 0.79 0.00
184_V 142_F 0.79 0.00
223_C 230_V 0.79 0.00
163_G 118_S 0.78 0.00
92_S 203_A 0.78 0.00
24_P 210_D 0.78 0.00
161_V 31_A 0.78 0.00
250_S 64_A 0.77 0.00
272_P 50_Q 0.77 0.00
178_H 234_K 0.77 0.00
46_L 64_A 0.77 0.00
169_Y 210_D 0.77 0.00
204_S 177_K 0.77 0.00
92_S 230_V 0.76 0.00
179_K 29_I 0.76 0.00
241_F 158_A 0.76 0.00
150_G 153_G 0.76 0.00
180_L 132_V 0.76 0.00
189_T 225_A 0.76 0.00
229_L 51_V 0.76 0.00
198_A 195_K 0.76 0.00
225_I 231_M 0.75 0.00
196_G 27_F 0.75 0.00
33_L 129_N 0.75 0.00
250_S 165_T 0.74 0.00
184_V 118_S 0.74 0.00
203_I 178_D 0.74 0.00
14_P 10_K 0.74 0.00
198_A 212_K 0.74 0.00
6_L 40_E 0.74 0.00
94_G 182_T 0.74 0.00
8_S 29_I 0.73 0.00
250_S 144_T 0.73 0.00
193_F 193_L 0.73 0.00
15_V 170_V 0.73 0.00
175_F 46_E 0.73 0.00
135_M 31_A 0.73 0.00
226_V 35_D 0.73 0.00
206_G 51_V 0.73 0.00
30_I 86_M 0.72 0.00
155_L 88_G 0.72 0.00
245_A 166_K 0.72 0.00
91_A 194_E 0.72 0.00
62_C 113_V 0.72 0.00
198_A 129_N 0.72 0.00
32_T 180_T 0.72 0.00
9_A 9_Y 0.72 0.00
170_M 29_I 0.72 0.00
250_S 163_K 0.71 0.00
224_S 123_I 0.71 0.00
173_K 163_K 0.71 0.00
163_G 207_L 0.71 0.00
181_A 25_E 0.71 0.00
189_T 183_M 0.71 0.00
277_L 12_I 0.71 0.00
266_S 22_Q 0.70 0.00
201_A 88_G 0.70 0.00
221_L 126_L 0.70 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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