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OPENSEQ.org

END3 - YBJK
UniProt: P0AB83 - P75811
Length: 389
Sequences: 245
Seq/Len: 0.65
I_Prob: 0.00

END3 - Endonuclease III
Paralog alert: 0.86 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: END3
YBJK - Uncharacterized HTH-type transcriptional regulator YbjK
Paralog alert: 0.76 [within 20: 0.18] - ratio of genomes with paralogs
Cluster includes: ACRR BDCR BETI COMR ENVR NEMR RUTR SLMA UIDR YBIH YBJK YJDC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
60_T 49_F 1.11 0.00
169_A 34_I 1.03 0.00
65_L 29_V 1.02 0.00
117_V 28_A 0.96 0.00
28_S 12_K 0.91 0.00
89_I 132_Q 0.90 0.00
117_V 36_T 0.88 0.00
56_P 34_I 0.88 0.00
179_L 40_V 0.88 0.00
74_T 59_A 0.87 0.00
99_Q 89_T 0.85 0.00
144_V 134_L 0.83 0.00
19_H 150_I 0.83 0.00
91_K 54_E 0.82 0.00
131_G 83_G 0.82 0.00
125_V 160_D 0.81 0.00
82_Y 137_W 0.81 0.00
205_Y 136_Q 0.81 0.00
165_K 142_T 0.81 0.00
37_L 36_T 0.80 0.00
102_G 39_G 0.80 0.00
186_T 81_A 0.80 0.00
72_V 111_A 0.79 0.00
144_V 46_T 0.79 0.00
63_A 18_L 0.79 0.00
70_E 55_L 0.79 0.00
66_E 121_T 0.78 0.00
113_A 162_K 0.78 0.00
130_F 10_R 0.78 0.00
47_V 49_F 0.78 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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