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HYPC - HYPD
UniProt: P0AAM3 - P24192
Length: 463
Sequences: 429
Seq/Len: 0.96
I_Prob: 0.08

HYPC - Hydrogenase isoenzymes formation protein HypC
Paralog alert: 0.49 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: HYBG HYPC
HYPD - Hydrogenase isoenzymes formation protein HypD
Paralog alert: 0.02 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: HYPD
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
73_N 289_E 1.63 0.08
33_V 61_V 1.39 0.04
52_V 145_L 1.27 0.03
9_I 113_K 1.25 0.03
26_R 127_D 1.21 0.02
9_I 275_C 1.17 0.02
28_V 101_R 1.16 0.02
49_L 254_Y 1.16 0.02
59_I 7_Y 1.15 0.02
54_F 89_P 1.11 0.02
28_V 251_E 1.09 0.02
56_M 204_M 1.09 0.02
40_G 265_L 1.06 0.01
50_V 273_V 1.06 0.01
64_A 211_Y 1.05 0.01
24_I 221_P 1.02 0.01
17_A 236_V 1.01 0.01
4_G 129_L 1.00 0.01
12_I 261_A 1.00 0.01
75_F 326_V 0.98 0.01
25_Q 79_I 0.98 0.01
59_I 347_T 0.98 0.01
52_V 74_L 0.98 0.01
49_L 63_F 0.98 0.01
60_N 364_Y 0.96 0.01
22_C 193_I 0.95 0.01
42_P 113_K 0.94 0.01
8_Q 218_F 0.94 0.01
9_I 239_L 0.93 0.01
67_T 13_V 0.93 0.01
12_I 141_V 0.93 0.01
5_V 214_I 0.93 0.01
71_L 7_Y 0.92 0.01
62_A 53_L 0.92 0.01
62_A 261_A 0.92 0.01
32_L 239_L 0.92 0.01
32_L 44_H 0.92 0.01
59_I 141_V 0.92 0.01
46_Q 241_Q 0.91 0.01
4_G 125_P 0.91 0.01
52_V 43_G 0.90 0.01
57_S 257_V 0.90 0.01
71_L 224_V 0.90 0.01
57_S 253_Q 0.89 0.01
52_V 65_H 0.89 0.01
13_D 37_I 0.88 0.01
40_G 218_F 0.88 0.01
71_L 172_F 0.87 0.01
52_V 176_I 0.87 0.01
19_V 113_K 0.86 0.01
24_I 240_V 0.85 0.01
47_W 197_L 0.85 0.01
20_D 85_I 0.85 0.01
30_L 179_I 0.85 0.01
68_L 7_Y 0.84 0.01
9_I 158_L 0.84 0.01
49_L 57_L 0.83 0.01
72_Q 219_H 0.83 0.01
24_I 9_A 0.82 0.01
64_A 203_S 0.82 0.01
30_L 265_L 0.82 0.01
28_V 205_V 0.81 0.01
52_V 198_A 0.81 0.01
29_D 119_V 0.81 0.01
56_M 54_D 0.81 0.01
24_I 113_K 0.81 0.01
44_V 33_R 0.81 0.01
52_V 101_R 0.81 0.01
61_E 211_Y 0.81 0.01
32_L 108_S 0.80 0.01
26_R 224_V 0.79 0.01
33_V 5_D 0.79 0.01
65_R 2_R 0.79 0.01
24_I 20_L 0.79 0.01
29_D 110_L 0.78 0.01
4_G 224_V 0.78 0.01
59_I 257_V 0.78 0.01
5_V 180_P 0.77 0.01
49_L 200_G 0.77 0.01
28_V 127_D 0.77 0.01
74_M 233_L 0.77 0.01
8_Q 90_E 0.77 0.01
26_R 94_C 0.76 0.01
11_T 188_Q 0.76 0.01
70_A 84_E 0.76 0.01
42_P 145_L 0.76 0.01
57_S 326_V 0.75 0.01
71_L 253_Q 0.75 0.01
21_V 49_F 0.75 0.00
32_L 323_C 0.74 0.00
44_V 137_T 0.74 0.00
27_D 165_D 0.74 0.00
33_V 131_L 0.74 0.00
54_F 156_I 0.74 0.00
52_V 78_R 0.74 0.00
46_Q 340_G 0.73 0.00
68_L 305_E 0.73 0.00
67_T 273_V 0.73 0.00
8_Q 50_K 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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