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OPENSEQ.org

RHTA - SUPH
UniProt: P0AA67 - P75792
Length: 566
Sequences: 450
Seq/Len: 0.84
I_Prob: 0.00

RHTA - Inner membrane transporter RhtA
Paralog alert: 0.84 [within 20: 0.20] - ratio of genomes with paralogs
Cluster includes: EAMA RHTA YDDG YEDA YHBE YICL YIJE YTFF
SUPH - Sugar phosphatase YbiV
Paralog alert: 0.75 [within 20: 0.18] - ratio of genomes with paralogs
Cluster includes: COF MPGP SUPH YBHA YBJI YIDA YIGL
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
223_Y 185_L 1.13 0.00
157_G 246_A 1.12 0.00
151_A 35_K 1.01 0.00
253_G 65_V 1.01 0.00
35_F 204_D 0.98 0.00
161_A 241_Q 0.96 0.00
103_L 237_E 0.93 0.00
251_V 240_K 0.93 0.00
161_A 183_I 0.92 0.00
256_F 230_F 0.91 0.00
29_S 84_L 0.90 0.00
91_S 21_Y 0.90 0.00
156_A 201_K 0.90 0.00
53_L 220_A 0.89 0.00
129_V 246_A 0.88 0.00
98_G 28_A 0.88 0.00
83_G 239_I 0.88 0.00
123_V 240_K 0.87 0.00
59_F 175_P 0.86 0.00
75_L 79_L 0.86 0.00
259_E 185_L 0.85 0.00
98_G 230_F 0.85 0.00
16_I 210_V 0.84 0.00
169_R 10_M 0.84 0.00
272_I 182_F 0.84 0.00
172_A 65_V 0.83 0.00
111_V 191_H 0.82 0.00
217_L 229_S 0.82 0.00
15_V 195_G 0.81 0.00
277_M 85_T 0.80 0.00
134_F 38_I 0.80 0.00
250_A 223_L 0.80 0.00
83_G 246_A 0.80 0.00
236_R 223_L 0.80 0.00
134_F 6_I 0.80 0.00
52_T 170_D 0.79 0.00
168_Q 104_F 0.79 0.00
19_V 45_G 0.79 0.00
19_V 224_K 0.79 0.00
161_A 78_Q 0.78 0.00
122_F 84_L 0.78 0.00
93_Q 239_I 0.78 0.00
109_L 240_K 0.78 0.00
154_L 185_L 0.78 0.00
165_L 78_Q 0.78 0.00
68_K 77_K 0.78 0.00
76_F 92_V 0.78 0.00
244_M 72_V 0.77 0.00
235_T 15_L 0.77 0.00
25_Q 8_T 0.77 0.00
173_E 249_D 0.77 0.00
134_F 262_V 0.77 0.00
212_L 19_K 0.76 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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