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OPENSEQ.org

SSRP - YBFF
UniProt: P0A832 - P75736
Length: 414
Sequences: 274
Seq/Len: 0.69
I_Prob: 0.00

SSRP - SsrA-binding protein
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: SSRP
YBFF - Esterase YbfF
Paralog alert: 0.80 [within 20: 0.26] - ratio of genomes with paralogs
Cluster includes: BIOH DLHH MENH MHPC PLDB RUTD YBFF YCJY YFHR YGHX YJFP
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
96_E 42_D 1.28 0.00
41_V 53_H 1.27 0.00
112_V 48_V 1.27 0.00
55_Y 191_I 1.24 0.00
116_L 230_A 1.19 0.00
112_V 76_D 1.18 0.00
142_I 201_I 1.16 0.00
142_I 19_I 1.15 0.00
41_V 229_I 1.15 0.00
96_E 50_M 1.08 0.00
18_K 220_Q 1.08 0.00
129_V 147_A 1.08 0.00
143_K 22_V 1.06 0.00
96_E 242_D 1.05 0.00
111_V 223_Q 1.04 0.00
55_Y 19_I 1.03 0.00
54_S 86_I 1.01 0.00
34_L 189_E 1.00 0.00
131_K 156_E 0.98 0.00
14_I 111_A 0.98 0.00
59_R 106_I 0.97 0.00
61_G 252_L 0.96 0.00
60_D 192_P 0.95 0.00
131_K 95_V 0.94 0.00
13_T 230_A 0.94 0.00
70_I 122_R 0.94 0.00
127_I 148_I 0.94 0.00
127_I 73_D 0.93 0.00
148_Q 191_I 0.93 0.00
54_S 85_F 0.92 0.00
112_V 147_A 0.92 0.00
96_E 160_Q 0.92 0.00
18_K 208_Y 0.92 0.00
14_I 224_A 0.91 0.00
13_T 81_D 0.91 0.00
123_C 51_R 0.90 0.00
128_G 209_V 0.89 0.00
43_S 251_Y 0.89 0.00
127_I 249_R 0.89 0.00
44_L 146_A 0.89 0.00
28_E 71_L 0.89 0.00
51_I 33_G 0.89 0.00
13_T 204_G 0.87 0.00
50_N 204_G 0.86 0.00
18_K 203_G 0.85 0.00
94_Q 110_V 0.85 0.00
46_A 66_A 0.85 0.00
141_D 109_L 0.84 0.00
51_I 135_S 0.84 0.00
92_L 70_D 0.84 0.00
94_Q 99_T 0.84 0.00
105_N 62_M 0.84 0.00
116_L 17_S 0.84 0.00
28_E 119_Y 0.83 0.00
134_K 87_G 0.83 0.00
111_V 154_N 0.82 0.00
110_T 69_Q 0.82 0.00
155_M 230_A 0.82 0.00
68_A 110_V 0.81 0.00
59_R 108_K 0.81 0.00
49_A 231_G 0.81 0.00
130_A 114_I 0.81 0.00
125_V 196_H 0.81 0.00
102_G 157_G 0.81 0.00
26_I 200_F 0.80 0.00
55_Y 128_F 0.80 0.00
130_A 17_S 0.80 0.00
48_K 85_F 0.80 0.00
18_K 73_D 0.80 0.00
58_L 189_E 0.80 0.00
153_R 48_V 0.79 0.00
18_K 34_V 0.78 0.00
155_M 200_F 0.78 0.00
64_F 183_P 0.78 0.00
64_F 65_P 0.78 0.00
158_A 198_A 0.78 0.00
55_Y 108_K 0.77 0.00
14_I 68_A 0.77 0.00
144_E 106_I 0.77 0.00
55_Y 236_V 0.77 0.00
23_E 217_L 0.77 0.00
152_A 114_I 0.76 0.00
76_A 229_I 0.76 0.00
48_K 237_H 0.76 0.00
41_V 236_V 0.76 0.00
34_L 191_I 0.76 0.00
111_V 236_V 0.75 0.00
134_K 178_L 0.75 0.00
150_D 72_V 0.75 0.00
65_L 174_N 0.75 0.00
61_G 110_V 0.75 0.00
58_L 117_V 0.75 0.00
44_L 93_K 0.75 0.00
120_N 137_S 0.74 0.00
56_V 177_V 0.74 0.00
68_A 28_S 0.74 0.00
106_R 75_L 0.74 0.00
41_V 210_S 0.74 0.00
121_A 197_P 0.74 0.00
148_Q 172_R 0.74 0.00
106_R 28_S 0.74 0.00
25_F 19_I 0.74 0.00
54_S 109_L 0.73 0.00
146_E 216_D 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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