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OPENSEQ.org

RUVC - YEBC
UniProt: P0A814 - P0A8A0
Length: 419
Sequences: 500
Seq/Len: 1.23
I_Prob: 0.01

RUVC - Crossover junction endodeoxyribonuclease RuvC
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RUVC
YEBC - Probable transcriptional regulatory protein YebC
Paralog alert: 0.23 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: YEBC YEEN
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
49_Y 34_T 1.32 0.01
107_V 186_L 1.27 0.01
148_I 148_D 1.20 0.00
86_G 221_D 1.15 0.00
141_A 72_R 1.06 0.00
48_I 197_E 1.04 0.00
112_V 244_A 1.03 0.00
110_T 34_T 1.02 0.00
48_I 91_G 1.00 0.00
7_I 125_G 0.99 0.00
160_M 143_E 0.98 0.00
81_L 50_R 0.98 0.00
40_D 239_S 0.96 0.00
20_R 156_E 0.95 0.00
3_I 71_A 0.95 0.00
150_H 23_K 0.94 0.00
100_F 24_I 0.93 0.00
18_V 208_M 0.93 0.00
77_S 50_R 0.92 0.00
71_M 62_T 0.91 0.00
153_V 41_G 0.90 0.00
66_I 97_I 0.89 0.00
90_V 100_E 0.89 0.00
89_I 54_D 0.89 0.00
148_I 131_A 0.89 0.00
84_A 159_A 0.88 0.00
81_L 110_V 0.88 0.00
11_S 102_L 0.88 0.00
5_L 166_D 0.87 0.00
80_K 119_K 0.87 0.00
124_H 30_R 0.86 0.00
41_L 53_V 0.86 0.00
83_Q 128_G 0.85 0.00
20_R 202_P 0.85 0.00
62_D 181_K 0.84 0.00
104_A 62_T 0.84 0.00
103_A 55_K 0.84 0.00
51_G 37_K 0.84 0.00
97_L 27_K 0.81 0.00
110_T 179_M 0.81 0.00
104_A 184_D 0.81 0.00
99_V 138_G 0.81 0.00
116_S 19_A 0.80 0.00
14_T 61_M 0.80 0.00
54_E 219_L 0.80 0.00
95_Q 41_G 0.79 0.00
11_S 136_K 0.79 0.00
81_L 47_P 0.79 0.00
82_G 125_G 0.79 0.00
146_I 167_D 0.79 0.00
69_V 110_V 0.79 0.00
131_K 245_T 0.79 0.00
32_G 50_R 0.79 0.00
102_Y 50_R 0.78 0.00
77_S 63_R 0.78 0.00
92_A 11_R 0.78 0.00
92_A 222_M 0.78 0.00
98_P 211_E 0.78 0.00
139_D 72_R 0.77 0.00
32_G 112_E 0.77 0.00
152_H 237_E 0.77 0.00
126_V 204_T 0.77 0.00
48_I 136_K 0.77 0.00
85_R 52_A 0.77 0.00
50_A 218_R 0.77 0.00
75_A 225_D 0.77 0.00
48_I 145_G 0.77 0.00
112_V 9_N 0.76 0.00
40_D 145_G 0.76 0.00
112_V 142_F 0.76 0.00
139_D 9_N 0.76 0.00
20_R 241_E 0.76 0.00
7_I 37_K 0.76 0.00
128_T 237_E 0.76 0.00
152_H 61_M 0.75 0.00
109_Q 76_G 0.75 0.00
70_F 23_K 0.75 0.00
161_S 160_E 0.75 0.00
26_L 126_T 0.75 0.00
62_D 53_V 0.75 0.00
114_I 129_S 0.75 0.00
81_L 31_E 0.74 0.00
84_A 145_G 0.74 0.00
59_F 240_D 0.74 0.00
56_I 109_T 0.74 0.00
48_I 8_A 0.74 0.00
52_V 202_P 0.74 0.00
48_I 176_W 0.73 0.00
14_T 31_E 0.73 0.00
76_D 62_T 0.73 0.00
65_A 85_I 0.73 0.00
23_G 240_D 0.73 0.00
3_I 133_L 0.73 0.00
83_Q 17_Q 0.73 0.00
148_I 25_F 0.72 0.00
87_V 159_A 0.72 0.00
11_S 110_V 0.72 0.00
110_T 118_S 0.72 0.00
149_T 82_M 0.72 0.00
122_V 111_A 0.72 0.00
66_I 236_G 0.72 0.00
18_V 240_D 0.72 0.00
140_A 231_E 0.72 0.00
149_T 208_M 0.71 0.00
59_F 199_S 0.71 0.00
85_R 33_V 0.71 0.00
7_I 119_K 0.70 0.00
25_Q 112_E 0.70 0.00
84_A 206_A 0.70 0.00
149_T 129_S 0.70 0.00
89_I 70_I 0.70 0.00
29_L 133_L 0.70 0.00
51_G 83_E 0.70 0.00
151_C 28_I 0.69 0.00
154_S 237_E 0.69 0.00
149_T 178_E 0.69 0.00
96_E 106_R 0.69 0.00
39_D 84_T 0.69 0.00
105_R 210_A 0.69 0.00
11_S 12_H 0.69 0.00
12_R 110_V 0.69 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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