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OPENSEQ.org

RL20 - SYT
UniProt: P0A7L3 - P0A8M3
Length: 760
Sequences: 537
Seq/Len: 0.71
I_Prob: 0.00

RL20 - 50S ribosomal protein L20
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RL20
SYT - Threonine--tRNA ligase
Paralog alert: 0.06 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: SYT
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
78_K 599_K 1.15 0.00
88_V 56_Q 1.12 0.00
88_V 407_M 1.12 0.00
88_V 474_L 1.09 0.00
69_A 499_G 1.07 0.00
87_S 596_C 1.05 0.00
25_Y 314_K 1.05 0.00
74_I 433_M 1.05 0.00
11_R 188_P 1.04 0.00
47_Y 261_P 1.03 0.00
91_D 28_G 1.03 0.00
97_D 502_N 0.99 0.00
116_A 590_V 0.99 0.00
96_A 249_K 0.97 0.00
53_R 487_F 0.96 0.00
48_R 575_N 0.96 0.00
100_V 239_A 0.92 0.00
111_E 558_L 0.92 0.00
15_K 608_V 0.90 0.00
74_I 558_L 0.89 0.00
75_S 189_N 0.89 0.00
41_K 468_F 0.89 0.00
51_R 530_A 0.88 0.00
17_I 53_N 0.87 0.00
116_A 556_N 0.87 0.00
7_G 196_F 0.86 0.00
2_A 426_K 0.86 0.00
96_A 239_A 0.86 0.00
12_A 391_E 0.85 0.00
101_F 360_S 0.85 0.00
110_V 401_I 0.85 0.00
51_R 38_G 0.85 0.00
27_A 247_I 0.85 0.00
14_H 165_A 0.84 0.00
63_A 129_E 0.84 0.00
78_K 505_K 0.84 0.00
90_I 284_K 0.83 0.00
111_E 14_Y 0.83 0.00
32_Y 179_V 0.83 0.00
16_K 87_W 0.82 0.00
110_V 563_S 0.81 0.00
71_Q 146_E 0.81 0.00
28_R 199_M 0.81 0.00
96_A 133_D 0.81 0.00
2_A 115_E 0.81 0.00
68_A 298_M 0.81 0.00
115_A 402_R 0.81 0.00
17_I 70_I 0.81 0.00
14_H 258_E 0.80 0.00
90_I 228_A 0.80 0.00
101_F 502_N 0.80 0.00
116_A 13_H 0.79 0.00
97_D 500_E 0.79 0.00
84_K 226_K 0.79 0.00
68_A 230_N 0.79 0.00
13_R 251_L 0.78 0.00
46_A 575_N 0.78 0.00
56_Q 342_N 0.78 0.00
20_Q 631_E 0.78 0.00
11_R 378_G 0.78 0.00
17_I 395_D 0.78 0.00
110_V 544_I 0.77 0.00
9_I 518_M 0.77 0.00
88_V 130_K 0.77 0.00
88_V 420_L 0.77 0.00
91_D 312_N 0.77 0.00
116_A 3_V 0.77 0.00
80_I 249_K 0.77 0.00
87_S 87_W 0.77 0.00
40_I 580_F 0.77 0.00
28_R 492_R 0.77 0.00
116_A 43_E 0.76 0.00
109_L 315_D 0.76 0.00
17_I 12_R 0.76 0.00
36_F 123_R 0.75 0.00
103_K 260_A 0.75 0.00
11_R 615_D 0.75 0.00
22_K 212_N 0.74 0.00
47_Y 487_F 0.74 0.00
79_F 149_A 0.74 0.00
17_I 533_F 0.74 0.00
45_Y 278_E 0.74 0.00
38_A 70_I 0.74 0.00
42_A 228_A 0.74 0.00
12_A 549_D 0.73 0.00
31_V 114_Q 0.73 0.00
4_V 79_L 0.73 0.00
59_Q 123_R 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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