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RECF - RL34
UniProt: P0A7H0 - P0A7P5
Length: 403
Sequences: 395
Seq/Len: 0.99
I_Prob: 0.02

RECF - DNA replication and repair protein RecF
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RECF
RL34 - 50S ribosomal protein L34
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RL34
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
85_L 32_A 1.49 0.02
42_A 12_R 1.48 0.01
281_L 5_F 1.37 0.01
227_E 5_F 1.30 0.01
298_L 43_T 1.30 0.01
105_V 13_N 1.20 0.01
164_A 5_F 1.18 0.01
187_Q 14_R 1.12 0.01
236_R 41_R 1.08 0.01
253_K 37_K 1.06 0.01
40_L 14_R 1.06 0.01
209_Q 33_R 1.04 0.01
34_S 14_R 1.02 0.01
273_Q 26_N 1.02 0.01
247_T 43_T 1.01 0.00
34_S 31_L 1.01 0.00
119_P 16_H 1.01 0.00
338_I 24_T 1.00 0.00
315_L 15_S 0.99 0.00
258_I 43_T 0.98 0.00
328_F 41_R 0.97 0.00
123_T 32_A 0.96 0.00
159_K 3_R 0.95 0.00
258_I 30_V 0.94 0.00
257_R 14_R 0.94 0.00
19_L 25_K 0.93 0.00
349_T 33_R 0.93 0.00
103_H 15_S 0.93 0.00
151_W 14_R 0.93 0.00
155_K 8_S 0.93 0.00
306_S 16_H 0.93 0.00
161_R 19_R 0.92 0.00
213_E 5_F 0.92 0.00
255_D 16_H 0.91 0.00
200_A 26_N 0.89 0.00
163_A 20_A 0.87 0.00
38_S 10_L 0.87 0.00
356_T 32_A 0.86 0.00
279_C 40_A 0.86 0.00
99_G 32_A 0.86 0.00
84_G 3_R 0.86 0.00
215_S 14_R 0.85 0.00
49_G 13_N 0.85 0.00
91_G 40_A 0.85 0.00
280_A 33_R 0.85 0.00
317_A 43_T 0.84 0.00
128_G 11_K 0.84 0.00
181_L 12_R 0.82 0.00
319_R 8_S 0.82 0.00
293_S 40_A 0.82 0.00
126_N 8_S 0.82 0.00
109_A 5_F 0.82 0.00
67_A 33_R 0.81 0.00
333_S 3_R 0.81 0.00
233_V 5_F 0.81 0.00
298_L 44_V 0.81 0.00
289_L 13_N 0.81 0.00
76_G 31_L 0.80 0.00
216_L 31_L 0.80 0.00
177_W 9_V 0.80 0.00
230_Y 33_R 0.80 0.00
347_M 12_R 0.79 0.00
195_Y 26_N 0.79 0.00
228_T 41_R 0.78 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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